RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	HSF4	Q9ULV5	492 aa		7.92	□□□□□ -1.14
CALD1-223	ENST00000496024	VGLL3	A8MV65	326 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	RAB27B	O00194	218 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	CHST1	O43916	411 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	MADCAM1	Q13477	382 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	ARFRP1	Q13795	201 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	HMGN3	Q15651	99 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	AANAT	Q16613	207 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	GPR107	Q5VW38	600 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	CCBE1	Q6UXH8	406 aa	Predicted RBP	7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	OR52M1	Q8NGK5	317 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	MAFIP	Q8WZ33	124 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	PTX4	Q96A99	478 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	CREB3L1	Q96BA8	519 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	GALM	Q96C23	342 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	NAA50	Q9GZZ1	169 aa	Known RBP	7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	RIMS4	Q9H426	269 aa	Predicted RBP	7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	C12orf4	Q9NQ89	552 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	RHBDL2	Q9NX52	303 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	ELF5	Q9UKW6	265 aa	Predicted RBP	7.91	□□□□□ -1.14
CALD1-223	ENST00000496024	TCF19	Q9Y242	345 aa		7.91	□□□□□ -1.14
CALD1-223	ENST00000496024		A6NDX4	124 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	LY6L	H3BQJ8	138 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	MFNG	O00587	321 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	TIMM23	O14925	209 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	HIST1H1D	P16402	221 aa	Known RBP	7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	BRS3	P32247	399 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	TALDO1	P37837	337 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	MNDA	P41218	407 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	ARHGDIB	P52566	201 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	ZNF134	P52741	427 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	HLA-DRB3	P79483	266 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	CDNF	Q49AH0	187 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	CT45A1	Q5HYN5	189 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	CCDC144NL	Q6NUI1	221 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	ZNF880	Q6PDB4	577 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	SLC16A12	Q6ZSM3	486 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024		Q6ZSV7	163 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	MOB1B	Q7L9L4	216 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	GPR141	Q7Z602	305 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	ZNF554	Q86TJ5	538 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	IZUMO1	Q8IYV9	350 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	DRAM1	Q8N682	238 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	OR4F5	Q8NH21	305 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	CT45A3	Q8NHU0	189 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	CAPSL	Q8WWF8	208 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	BEX1	Q9HBH7	125 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024		Q9N2K0	584 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	SLC23A1	Q9UHI7	598 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	ZNF230	Q9UIE0	474 aa	Predicted RBP	7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	PITPNC1	Q9UKF7	332 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	KCNK7	Q9Y2U2	307 aa		7.9	□□□□□ -1.14
CALD1-223	ENST00000496024	TRBV6-6	A0A0A6YYG2	114 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	IGHV3-72	A0A0B4J1Y9	119 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	HSD17B6	O14756	317 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	HSPA12A	O43301	675 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	RGS11	O94810	467 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	NDUFA7	O95182	113 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	TFAP2A	P05549	437 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	FCGR3A	P08637	254 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	SCT	P09683	121 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	IL3RA	P26951	378 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	COMP	P49747	757 aa	Predicted RBP	7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	DYNLT3	P51808	116 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	RPL15	P61313	204 aa	Known RBP	7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	HTD2	P86397	168 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	HES1	Q14469	280 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	TMEM30B	Q3MIR4	351 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	MORN2	Q502X0	79 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	FBLN7	Q53RD9	439 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	SLC25A48	Q6ZT89	311 aa	Known RBP	7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	MOB3B	Q86TA1	216 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	LYG1	Q8N1E2	194 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	LINC00311	Q8N616	119 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	DTX3	Q8N9I9	347 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	OR56B4	Q8NH76	319 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	PHF21A	Q96BD5	680 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	SLC25A38	Q96DW6	304 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	OCSTAMP	Q9BR26	566 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	ABHD14A	Q9BUJ0	271 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	PARP12	Q9H0J9	701 aa	Known RBP	7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	RAB18	Q9NP72	206 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	OR1A1	Q9P1Q5	309 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	JPT1	Q9UK76	154 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	SIGLEC9	Q9Y336	463 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	ETV7	Q9Y603	341 aa		7.89	□□□□□ -1.15
CALD1-223	ENST00000496024	TRAV18	A0A075B6X5	111 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024		A0A1W2PPI3	338 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	CLPSL1	A2RUU4	121 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	TMEM235	A6NFC5	223 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	OOSP1	A8MZH6	123 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	TRDC	B7Z8K6	153 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	YPEL1	O60688	119 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	GAPDH	P04406	335 aa	Known RBP	7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	SNRNP70	P08621	437 aa	Known RBP	7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	ALDH3B2	P48448	385 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	RAB7A	P51149	207 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	HNF4G	Q14541	408 aa		7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.88	□□□□□ -1.15
CALD1-223	ENST00000496024	LIAT1	Q6ZQX7	453 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms