RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SPIN2BQ9BPZ2 258 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 GSX2Q9BZM3 304 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 SLC5A7Q9GZV3 580 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 NCOR1P1Q9H4R4 102 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 RDH8Q9NYR8 311 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 MBD2Q9UBB5 411 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 KIF25Q9UIL4 384 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 TRAPPC2LQ9UL33 140 aa13.65□□□□□ -0.22
CBX4-204ENST00000495122 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 C3orf85A0A1B0GTC6 90 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 A0A1B0GW55 424 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 RNF222A6NCQ9 220 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.64□□□□□ -0.23
CBX4-204ENST00000495122 HSPB6O14558 160 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 SIAH2O43255 324 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 ADAP1O75689 374 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 RLN2P04090 185 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 OR5AC1P0C628 307 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 DUX4L2P0CJ85 424 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 DUX4L3P0CJ86 424 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 DUX4L4P0CJ87 422 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 DUX4L5P0CJ88 424 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 DUX4L6P0CJ89 424 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 DUX4L7P0CJ90 424 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 GNRHRP30968 328 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 DEFB113Q30KQ7 82 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 SLC7A5P1Q8MH63 180 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 BVESQ8NE79 360 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 OR2Z1Q8NG97 314 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 PLPPR1Q8TBJ4 325 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 MSI2Q96DH6 328 aaKnown RBP13.64□□□□□ -0.23
CBX4-204ENST00000495122 MEGF10Q96KG7 1140 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 TMEM56Q96MV1 263 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 AQP10Q96PS8 301 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 TMEM222Q9H0R3 208 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 MSL2Q9HCI7 577 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 DUX4Q9UBX2 424 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 NDRG3Q9UGV2 375 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 IL19Q9UHD0 177 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 TMEM56-RWDD3S4R434 201 aa13.64□□□□□ -0.23
CBX4-204ENST00000495122 OOEPA6NGQ2 149 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 ATP6V1G2-DDX39BF2Z307 99 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 H0Y980 276 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 CDS2O95674 445 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 HOXB5P09067 269 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 IAH1Q2TAA2 248 aaPredicted RBP13.63□□□□□ -0.23
CBX4-204ENST00000495122 PRAMEF6Q5VXH4 476 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 GGNBP1Q5YKI7 109 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 C20orf204Q6ZNR8 217 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 OR8H3Q8N146 312 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 ZBTB34Q8NCN2 500 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 GLYATL2Q8WU03 294 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 LRRC29Q8WV35 223 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 OR10C1Q96KK4 312 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 ARPC5LQ9BPX5 153 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 RAB9BQ9NP90 201 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 MED9Q9NWA0 146 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 DUSP13Q9UII6 198 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 AUP1Q9Y679 476 aa13.63□□□□□ -0.23
CBX4-204ENST00000495122 ROS1P08922 2347 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 hCG_1807616A0A1W2PRN6 198 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 ZSCAN5BA6NJL1 495 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 DEFB108AA8MXU0 73 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 TAAR5O14804 337 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 UCP1P25874 307 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 LUMP51884 338 aaPredicted RBP13.62□□□□□ -0.23
CBX4-204ENST00000495122 EIF5AP63241 154 aaKnown RBP13.62□□□□□ -0.23
CBX4-204ENST00000495122 LRRC37A5PQ49AS3 106 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 PHLDA2Q53GA4 152 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 OR10V1Q8NGI7 309 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 Q8TCH9 128 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 SECTM1Q8WVN6 248 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 DCUN1D4Q92564 292 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 WFIKKN1Q96NZ8 548 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 RNF126Q9BV68 326 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 FZR1Q9UM11 496 aa13.62□□□□□ -0.23
CBX4-204ENST00000495122 NSD1Q96L73 2696 aaPredicted RBP13.62□□□□□ -0.23
CBX4-204ENST00000495122 RNF212BA8MTL3 300 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
CBX4-204ENST00000495122 CD55P08174 381 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 RCC1P18754 421 aaPredicted RBP13.61□□□□□ -0.23
CBX4-204ENST00000495122 MSMPQ1L6U9 139 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 ZNF818PQ6ZRF7 136 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 ZNF826PQ6ZT77 177 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 TBC1D26Q86UD7 250 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 KRTAP1-3Q8IUG1 177 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 OR5D13Q8NGL4 314 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 STOML3Q8TAV4 291 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 OR2V2Q96R30 315 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 PLEKHA2Q9HB19 425 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 BEX4Q9NWD9 120 aaPredicted RBP13.61□□□□□ -0.23
CBX4-204ENST00000495122 OR14J1Q9UGF5 321 aa13.61□□□□□ -0.23
CBX4-204ENST00000495122 UBE2J1Q9Y385 318 aaPredicted RBP13.61□□□□□ -0.23
CBX4-204ENST00000495122 HEATR1Q9H583 2144 aaKnown RBP13.6□□□□□ -0.23
CBX4-204ENST00000495122 RPS10-NUDT3A0A1W2PQS6 291 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 LHBP01229 141 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 HEXAP06865 529 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 SLC25A6P12236 298 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 OR3A1P47881 315 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 ATXN7L3Q14CW9 347 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms