RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 FHL3Q13643 280 aa17.25■□□□□ 0.35
HDDC3-203ENST00000494993 YIF1BQ5BJH7 314 aa17.25■□□□□ 0.35
HDDC3-203ENST00000494993 TRAT1Q6PIZ9 186 aa17.25■□□□□ 0.35
HDDC3-203ENST00000494993 JAGN1Q8N5M9 183 aa17.25■□□□□ 0.35
HDDC3-203ENST00000494993 KCTD7Q96MP8 289 aa17.25■□□□□ 0.35
HDDC3-203ENST00000494993 SMPD3Q9NY59 655 aaPredicted RBP17.25■□□□□ 0.35
HDDC3-203ENST00000494993 CLEC2DQ9UHP7 191 aa17.25■□□□□ 0.35
HDDC3-203ENST00000494993 PEX16Q9Y5Y5 336 aa17.25■□□□□ 0.35
HDDC3-203ENST00000494993 U3KQK5 164 aa17.25■□□□□ 0.35
HDDC3-203ENST00000494993 LANCL1O43813 399 aa17.24■□□□□ 0.35
HDDC3-203ENST00000494993 OR5H8P0DN80 308 aa17.24■□□□□ 0.35
HDDC3-203ENST00000494993 RCC1P18754 421 aaPredicted RBP17.24■□□□□ 0.35
HDDC3-203ENST00000494993 ECI1P42126 302 aa17.24■□□□□ 0.35
HDDC3-203ENST00000494993 STEAP3Q658P3 488 aa17.24■□□□□ 0.35
HDDC3-203ENST00000494993 ZFP41Q8N8Y5 198 aa17.24■□□□□ 0.35
HDDC3-203ENST00000494993 PGLYRP3Q96LB9 341 aa17.24■□□□□ 0.35
HDDC3-203ENST00000494993 RDH12Q96NR8 316 aa17.24■□□□□ 0.35
HDDC3-203ENST00000494993 ZNF107Q9UII5 783 aaPredicted RBP17.24■□□□□ 0.35
HDDC3-203ENST00000494993 SCOCQ9UIL1 159 aa17.24■□□□□ 0.35
HDDC3-203ENST00000494993 TRBV5-7A0A0A0MS05 114 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 FAM90A10PA6NDY2 464 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 FAM90A7PA6NKC0 464 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 FAM90A23PA8MXZ1 464 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 CA11O75493 328 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 SC5DO75845 299 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 SLC2A2P11168 524 aaPredicted RBP17.23■□□□□ 0.35
HDDC3-203ENST00000494993 MMDQ15546 238 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 NKAPLQ5M9Q1 402 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 AWAT2Q6E213 333 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 MYOZ3Q8TDC0 251 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 OR14A2Q96R54 314 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 CHCHD6Q9BRQ6 235 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 BANF2Q9H503 90 aa17.23■□□□□ 0.35
HDDC3-203ENST00000494993 MYF6P23409 242 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 ADARB1P78563 741 aaKnown RBP17.22■□□□□ 0.35
HDDC3-203ENST00000494993 MED21Q13503 144 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 MORN2Q502X0 79 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 ZNF485Q8NCK3 441 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 OR11H1Q8NG94 326 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 TMEM80Q96HE8 168 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 SELENOIQ9C0D9 397 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 TAF9BQ9HBM6 251 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 OR2S2Q9NQN1 319 aa17.22■□□□□ 0.35
HDDC3-203ENST00000494993 CHCHD3Q9NX63 227 aaKnown RBP17.22■□□□□ 0.35
HDDC3-203ENST00000494993 STAB2Q8WWQ8 2551 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 A0A1W2PPK0 400 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 GLAP06280 429 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 MGMTP16455 207 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 PPIFP30405 207 aaKnown RBP17.21■□□□□ 0.35
HDDC3-203ENST00000494993 GNMTQ14749 295 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 ZNF260Q3ZCT1 412 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 CDH26Q8IXH8 852 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 Q96M66 194 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 ABHD14AQ9BUJ0 271 aa17.21■□□□□ 0.35
HDDC3-203ENST00000494993 MBNL3Q9NUK0 354 aaKnown RBP17.21■□□□□ 0.35
HDDC3-203ENST00000494993 UBE2QL1A1L167 161 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 MAS1P04201 325 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 FUT3P21217 361 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 SIGIRRQ6IA17 410 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 LYPD6Q86Y78 171 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 CYYR1Q96J86 154 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 UBE2E2Q96LR5 201 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 KCNIP1Q9NZI2 227 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 JPT1Q9UK76 154 aa17.2■□□□□ 0.34
HDDC3-203ENST00000494993 ZNF256Q9Y2P7 627 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-203ENST00000494993 I3L521 148 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 CRTAPO75718 401 aaPredicted RBP17.19■□□□□ 0.34
HDDC3-203ENST00000494993 OR8U8P0C7N1 319 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 ACTBP60709 375 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 KIAA0141Q14154 515 aaPredicted RBP17.19■□□□□ 0.34
HDDC3-203ENST00000494993 TMEM65Q6PI78 240 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 ZNF554Q86TJ5 538 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 ODF3L1Q8IXM7 274 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 ZNF491Q8N8L2 437 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 OR52L2PQ8NGH6 319 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 DERL3Q96Q80 235 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 MRPL20Q9BYC9 149 aaKnown RBP17.19■□□□□ 0.34
HDDC3-203ENST00000494993 KLK15Q9H2R5 256 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 GNB4Q9HAV0 340 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 WSB1Q9Y6I7 421 aa17.19■□□□□ 0.34
HDDC3-203ENST00000494993 PNMA8CA0A1B0GUJ8 204 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 G3V318 75 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 ATP6V0E1O15342 81 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 PDCD6O75340 191 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 BAG2O95816 211 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 HLA-DRB1P01911 266 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 CNTFRP26992 372 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 PPP1CCP36873 323 aaKnown RBP17.18■□□□□ 0.34
HDDC3-203ENST00000494993 CAPGP40121 348 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 TAS2R43P59537 309 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 RUNX1Q01196 453 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 DOC2BQ14184 412 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 ASPHD1Q5U4P2 390 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 C5orf24Q7Z6I8 188 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 MRPL30Q8TCC3 161 aaKnown RBP17.18■□□□□ 0.34
HDDC3-203ENST00000494993 ASCL2Q99929 193 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 NABP2Q9BQ15 211 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 ZNF251Q9BRH9 671 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 OR51J1Q9H342 316 aa17.18■□□□□ 0.34
HDDC3-203ENST00000494993 VSIG4Q9Y279 399 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms