RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 HIST1H2ACQ93077 130 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 TMEM106AQ96A25 262 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 LRRC58Q96CX6 371 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 DNAJC19Q96DA6 116 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 CIB3Q96Q77 187 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 TSPAN32Q96QS1 320 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 TBX15Q96SF7 602 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 GFI1Q99684 422 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 ATP5SQ99766 215 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 NKX3-1Q99801 234 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 RASL11BQ9BPW5 248 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 DERL1Q9BUN8 251 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 SLC25A31Q9H0C2 315 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 MS4A6AQ9H2W1 248 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 RBKSQ9H477 322 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 HES4Q9HCC6 221 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 RETNQ9HD89 108 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 IDI2-AS1Q9NZ38 188 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 RPS6KB2Q9UBS0 482 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 ABT1Q9ULW3 272 aaKnown RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 TP53TG1Q9Y2A0 90 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 WIPI2Q9Y4P8 454 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 UBIAD1Q9Y5Z9 338 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF780BQ9Y6R6 833 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 XIRP1Q702N8 1843 aaKnown RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 KIF13BQ9NQT8 1826 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 MARF1Q9Y4F3 1742 aaKnown RBP3.78□□□□□ -1.8
CCDC66-222ENST00000494672 ATRXP46100 2492 aa3.78□□□□□ -1.8
CCDC66-222ENST00000494672 ZNF142P52746 1687 aaPredicted RBP3.78□□□□□ -1.81
CCDC66-222ENST00000494672 KIF21BO75037 1637 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 ZNF318Q5VUA4 2279 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 IGHV4-4A0A075B6R2 117 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 A0A087WW49 117 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 A0A0D9SG52 128 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 IGHV1-69-2A0A0G2JMI3 117 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 TMEM8BA6NDV4 472 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 LMO7DNF2Z398 122 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 TAAR5O14804 337 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 CRXO43186 299 aaPredicted RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 EIF4E2O60573 245 aaKnown RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 TOXO94900 526 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 DIRAS1O95057 198 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 SOX14O95416 240 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 HLA-DQB1P01920 261 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 H1F0P07305 194 aaKnown RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 CTSDP07339 412 aaPredicted RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 CD14P08571 375 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 AKAIN1P0CW23 69 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 PVRP15151 417 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 ORM2P19652 201 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 GJB2P29033 226 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 SHC1P29353 583 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 LEPP41159 167 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 TSFMP43897 325 aaKnown RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 P2RY1P47900 373 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 OR12D2P58182 307 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 HSPE1P61604 102 aaKnown RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 RPS18P62269 152 aaKnown RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 RPL31P62899 125 aaKnown RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 EWSR1Q01844 656 aaKnown RBP eCLIP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 MEF2BQ02080 365 aaPredicted RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 FMODQ06828 376 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 KLRB1Q12918 225 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 DHRS2Q13268 280 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 FAM53BQ14153 422 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 RGNQ15493 299 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 C4orf26Q17RF5 130 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 TMEM183BQ1AE95 376 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 FAM166AQ6J272 317 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 IL34Q6ZMJ4 242 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 FAM19A1Q7Z5A9 133 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 FBXO16Q8IX29 292 aaPredicted RBP3.77□□□□□ -1.81
CCDC66-222ENST00000494672 TMEM183AQ8IXX5 376 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 OR2L13Q8N349 312 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 PNKDQ8N490 385 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 FTMTQ8N4E7 242 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 KRTCAP2Q8N6L1 136 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 GATD1Q8NB37 220 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 PLPP5Q8NEB5 264 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 OR52E2Q8NGJ4 325 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 OR2A12Q8NGT7 310 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 FBXO25Q8TCJ0 367 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 ZNF675Q8TD23 568 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 MBD3L1Q8WWY6 194 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 PP6455Q8WZ26 134 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 RDH5Q92781 318 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 PHYHIPLQ96FC7 376 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 CLCC1Q96S66 551 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 NRTNQ99748 197 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 C16orf70Q9BSU1 422 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 SAMD10Q9BYL1 202 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 SLC17A9Q9BYT1 436 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 OR2D2Q9H210 308 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 IFI27L2Q9H2X8 130 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 CDH20Q9HBT6 801 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 KCNJ16Q9NPI9 418 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 RPS10P5Q9NQ39 176 aa3.77□□□□□ -1.81
CCDC66-222ENST00000494672 C1orf123Q9NWV4 160 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms