RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 PPP1CBP62140 327 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 SRPXP78539 464 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 EIF3IQ13347 325 aaKnown RBP8.66□□□□□ -1.02
LINC00488-201ENST00000494582 MSMO1Q15800 293 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 KCNIP4Q6PIL6 250 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 OR2M3Q8NG83 312 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 OR1K1Q8NGR3 316 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.66□□□□□ -1.02
LINC00488-201ENST00000494582 APH1AQ96BI3 265 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 BMFQ96LC9 184 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 OR4C12Q96R67 309 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 FAM103A1Q9BTL3 118 aaKnown RBP8.66□□□□□ -1.02
LINC00488-201ENST00000494582 SLC39A9Q9NUM3 307 aa8.66□□□□□ -1.02
LINC00488-201ENST00000494582 PTRH2Q9Y3E5 179 aaKnown RBP8.66□□□□□ -1.02
LINC00488-201ENST00000494582 A0A1W2PN81 502 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 LIPT2A6NK58 231 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00488-201ENST00000494582 PPBPP02775 128 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 ESDP10768 282 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 KRTDAPP60985 99 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 PAFAH1B2P68402 229 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 PSG4Q00888 419 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 TFF2Q03403 129 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 MYBPHQ13203 477 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 SLC25A47Q6Q0C1 308 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 Q6ZN92 141 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 OR5AU1Q8NGC0 362 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 MRGPRDQ8TDS7 321 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 SLC37A2Q8TED4 501 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 CCL28Q9NRJ3 127 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 ASCC3Q8N3C0 2202 aaKnown RBP8.65□□□□□ -1.02
LINC00488-201ENST00000494582 IGHV2-70DA0A0C4DH43 119 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 NPIPB13A6NJU9 1138 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 NPIPB4C9JG80 1138 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 PAGE4O60829 102 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 MPLP40238 635 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 SNAI3Q3KNW1 292 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 ACSF3Q4G176 576 aaPredicted RBP8.65□□□□□ -1.02
LINC00488-201ENST00000494582 ZNF542PQ5EBM4 170 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 RIPPLY2Q5TAB7 128 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 C1orf174Q8IYL3 243 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 OR2AE1Q8NHA4 323 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 PSMF1Q92530 271 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 BTF3L4Q96K17 158 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 WDR61Q9GZS3 305 aaKnown RBP8.65□□□□□ -1.02
LINC00488-201ENST00000494582 ZDHHC11Q9H8X9 412 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 LAMA1P25391 3075 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 CHD9Q3L8U1 2897 aa8.65□□□□□ -1.02
LINC00488-201ENST00000494582 IGHV2OR16-5A0A0B4J2B6 119 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 UBE2L5PA0A1B0GUS4 154 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 OR6C6A6NF89 314 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 SLC22A20A6NK97 555 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 DIRC3C9JPN6 131 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 CBR3O75828 277 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 NAPSAO96009 420 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 ADH1BP00325 375 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 CRYAAP02489 173 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 HNRNPA2B1P22626 353 aaKnown RBP8.64□□□□□ -1.03
LINC00488-201ENST00000494582 PSMB3P49720 205 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 FOXL2P58012 376 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 YPEL3P61236 119 aaPredicted RBP8.64□□□□□ -1.03
LINC00488-201ENST00000494582 RNPS1Q15287 305 aaKnown RBP8.64□□□□□ -1.03
LINC00488-201ENST00000494582 FBLN7Q53RD9 439 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 TMPRSS7Q7RTY8 843 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 ZDHHC23Q8IYP9 409 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 OR4B1Q8NGF8 309 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 SGMS2Q8NHU3 365 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 PP6455Q8WZ26 134 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 DDIT4LQ96D03 193 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 RALGAPA1Q6GYQ0 2036 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 GON4LQ3T8J9 2241 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 TRAF3IP2O43734 574 aaPredicted RBP8.64□□□□□ -1.03
LINC00488-201ENST00000494582 SYNGR4O95473 234 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 SCTP09683 121 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
LINC00488-201ENST00000494582 SERF2P84101 59 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 NUDT10Q8NFP7 164 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 LOXL4Q96JB6 756 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 TXN2Q99757 166 aa8.64□□□□□ -1.03
LINC00488-201ENST00000494582 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
LINC00488-201ENST00000494582 GNB1P62873 340 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 ZNF468Q5VIY5 522 aaPredicted RBP8.63□□□□□ -1.03
LINC00488-201ENST00000494582 C12orf76Q8N812 135 aaPredicted RBP8.63□□□□□ -1.03
LINC00488-201ENST00000494582 OR5P3Q8WZ94 311 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 TAF15Q92804 592 aaKnown RBP eCLIP8.63□□□□□ -1.03
LINC00488-201ENST00000494582 UQCR10Q9UDW1 63 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 ST3GAL6Q9Y274 331 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 H3BMH7 237 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 VENTXO95231 258 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 CRISP2P16562 243 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 FOXL1Q12952 345 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 CNKSR3Q6P9H4 555 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 GCNT2Q8N0V5 402 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 ATOH7Q8N100 152 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 KCNE4Q8WWG9 221 aa8.63□□□□□ -1.03
LINC00488-201ENST00000494582 NEIL1Q96FI4 390 aaPredicted RBP8.63□□□□□ -1.03
LINC00488-201ENST00000494582 UHRF2Q96PU4 802 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms