RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 OR52L2PQ8NGH6 319 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 OR10V1Q8NGI7 309 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 TAF15Q92804 592 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL1A1-208ENST00000494334 CREB3L1Q96BA8 519 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 GALMQ96C23 342 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 OR2S2Q9NQN1 319 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL1A1-208ENST00000494334 GNG12Q9UBI6 72 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 VPREB3Q9UKI3 123 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 ELF5Q9UKW6 265 aaPredicted RBP10.93□□□□□ -0.66
COL1A1-208ENST00000494334 TMEM89A2RUT3 159 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 SLC31A2O15432 143 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 GPR137BO60478 399 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 CEACAM3P40198 252 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 DYNLT3P51808 116 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 ACTG1P63261 375 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 MRPS15P82914 257 aaKnown RBP10.92□□□□□ -0.66
COL1A1-208ENST00000494334 ARL6IP1Q15041 203 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 LY6EQ16553 131 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 ZNF260Q3ZCT1 412 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 MORN2Q502X0 79 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 TPTE2P1Q5T6R2 138 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 CLVS1Q8IUQ0 354 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-208ENST00000494334 C8orf31Q8N9H6 132 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 ZNF439Q8NDP4 499 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 OR10X1Q8NGY0 326 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 OCSTAMPQ9BR26 566 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 DCSTAMPQ9H295 470 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 SCOCQ9UIL1 159 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 JPT1Q9UK76 154 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 MGAT4AQ9UM21 535 aa10.92□□□□□ -0.66
COL1A1-208ENST00000494334 AMMECR1Q9Y4X0 333 aaPredicted RBP10.92□□□□□ -0.66
COL1A1-208ENST00000494334 YPEL1O60688 119 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 FCGR3AP08637 254 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 SCTP09683 121 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 HKR1P10072 659 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 RORCP51449 518 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 HLA-DRB3P79483 266 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 ARFRP1Q13795 201 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 DIAPH2-AS1Q14236 149 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 GNMTQ14749 295 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 CT45A1Q5HYN5 189 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 HACD4Q5VWC8 232 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 SLC25A48Q6ZT89 311 aaKnown RBP10.91□□□□□ -0.66
COL1A1-208ENST00000494334 CT45A3Q8NHU0 189 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 IL1F10Q8WWZ1 152 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 GCDHQ92947 438 aaPredicted RBP10.91□□□□□ -0.66
COL1A1-208ENST00000494334 KCTD12Q96CX2 325 aaKnown RBP10.91□□□□□ -0.66
COL1A1-208ENST00000494334 YPEL2Q96QA6 119 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 ABCG5Q9H222 651 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 ABCB10Q9NRK6 738 aa10.91□□□□□ -0.66
COL1A1-208ENST00000494334 ZNF230Q9UIE0 474 aaPredicted RBP10.91□□□□□ -0.66
COL1A1-208ENST00000494334 TRAV18A0A075B6X5 111 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 TMEM235A6NFC5 223 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 OOSP1A8MZH6 123 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 TRDCB7Z8K6 153 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 CRYBA1P05813 215 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 GSTP1P09211 210 aaKnown RBP10.9□□□□□ -0.66
COL1A1-208ENST00000494334 PPP1CCP36873 323 aaKnown RBP10.9□□□□□ -0.66
COL1A1-208ENST00000494334 MADCAM1Q13477 382 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 LY6G6FQ5SQ64 297 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 STEAP3Q658P3 488 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 CCBE1Q6UXH8 406 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-208ENST00000494334 IZUMO1Q8IYV9 350 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 SAMD12Q8N8I0 201 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 MAFIPQ8WZ33 124 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 RPEQ96AT9 228 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 PHF21AQ96BD5 680 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 DIABLOQ9NR28 239 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 C1RLQ9NZP8 487 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 COMMD3Q9UBI1 195 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 TCF19Q9Y242 345 aa10.9□□□□□ -0.66
COL1A1-208ENST00000494334 A0A0A6YYH2 397 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 IGKV1-6A0A0C4DH72 117 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 A6NJ64 397 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 RGS11O94810 467 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 GSTT2P0CG29 244 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 GSTT2BP0CG30 244 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 TALDO1P37837 337 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 TMBIM6P55061 237 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 RPL15P61313 204 aaKnown RBP10.89□□□□□ -0.67
COL1A1-208ENST00000494334 RELBQ01201 579 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 SPCS2Q15005 226 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 SRSF7Q16629 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL1A1-208ENST00000494334 PNLIPRP3Q17RR3 467 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 UBE2NLQ5JXB2 153 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 CCDC144NLQ6NUI1 221 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 RAB2BQ8WUD1 216 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 ACOT12Q8WYK0 555 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 TOMM40LQ969M1 308 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 ST6GALNAC6Q969X2 333 aa10.89□□□□□ -0.67
COL1A1-208ENST00000494334 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
COL1A1-208ENST00000494334 DNHD1Q96M86 4753 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 A6NDX4 124 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 HSD17B6O14756 317 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 FABP7O15540 132 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 SSX5O60225 188 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 ZNF182P17025 639 aaPredicted RBP10.88□□□□□ -0.67
COL1A1-208ENST00000494334 DTYMKP23919 212 aa10.88□□□□□ -0.67
COL1A1-208ENST00000494334 ZBTB25P24278 435 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms