RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 PLEKHJ1Q9NW61 149 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF581Q9P0T4 197 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 MRPS16Q9Y3D3 137 aaKnown RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 B3GALT1Q9Y5Z6 326 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 CHD8Q9HCK8 2581 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 A0A0U1RQK1 487 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF320A2RRD8 509 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 GYPAP02724 150 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 CCL1P22362 96 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 TNFSF4P23510 183 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 GCH1P30793 250 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 MDH2P40926 338 aaKnown RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ID3Q02535 119 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 CFHR1Q03591 330 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 FOXL1Q12952 345 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 SPATA45Q537H7 98 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 PHLDA2Q53GA4 152 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 DOK3Q7L591 496 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 COMMD2Q86X83 199 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 OR5B3Q8NH48 314 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 APH1AQ96BI3 265 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 TMEM56Q96MV1 263 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZFYVE21Q9BQ24 234 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 TMEM222Q9H0R3 208 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 PARLQ9H300 379 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF286AQ9HBT8 521 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF586Q9NXT0 402 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 NXT1Q9UKK6 140 aaKnown RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 MCTS1Q9ULC4 181 aaKnown RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 RNF115Q9Y4L5 304 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 TMEM56-RWDD3S4R434 201 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 LAMA1P25391 3075 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 CNOT1A5YKK6 2376 aaKnown RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 PIGBOS1A0A0B4J2F0 54 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 A0A1W2PNU3 283 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 HS3ST1O14792 307 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 NUPR1O60356 82 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 IGLC2P0DOY2 106 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 IGLC3P0DOY3 106 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF154Q13106 437 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 EXT1Q16394 746 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 FIGLAQ6QHK4 219 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 Q6ZN92 141 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 RNF144BQ7Z419 303 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ABHD12BQ7Z5M8 362 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 DTX1Q86Y01 620 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF695Q8IW36 515 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 WDFY1Q8IWB7 410 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ODF3L1Q8IXM7 274 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 C20orf196Q8IYI0 205 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 PNKDQ8N490 385 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 METTL27Q8N6F8 245 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 TMEM217Q8N7C4 229 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF709Q8N972 641 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 RPUSD4Q96CM3 377 aaKnown RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 STRADBQ9C0K7 418 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF703Q9H7S9 590 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 PATZ1Q9HBE1 687 aaKnown RBP6.07□□□□□ -1.44
EPHA3-203ENST00000494014 TUBG2Q9NRH3 451 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 STARD5Q9NSY2 213 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 SLC35D1Q9NTN3 355 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 RPH3ALQ9UNE2 315 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 VDAC3Q9Y277 283 aa6.07□□□□□ -1.44
EPHA3-203ENST00000494014 PHF3Q92576 2039 aaKnown RBP6.06□□□□□ -1.44
EPHA3-203ENST00000494014 PCNX3Q9H6A9 2034 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 KIAA2026Q5HYC2 2103 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 TRAV9-1A0A075B6T8 112 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 C3orf85A0A1B0GTC6 90 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 BLACEA4D250 179 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 PRSS47A8MTI9 375 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 K7ERU9 68 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 PLPP3O14495 311 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 TRAPPC6AO75865 159 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 JMJD7P0C870 316 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 GLB1P16278 677 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 COMPP49747 757 aaPredicted RBP6.06□□□□□ -1.44
EPHA3-203ENST00000494014 DAP3P51398 398 aaKnown RBP6.06□□□□□ -1.44
EPHA3-203ENST00000494014 FXYD4P59646 89 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 HERV-K104P61576 105 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 ARF6P62330 175 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 KISS1Q15726 138 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 NSDHLQ15738 373 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 ZNF726P1Q15940 193 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 CLEC12BQ2HXU8 276 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 OCIAD2Q56VL3 154 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 TSPO2Q5TGU0 170 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 MEX3BQ6ZN04 569 aaKnown RBP6.06□□□□□ -1.44
EPHA3-203ENST00000494014 LRP11Q86VZ4 500 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 TCTEX1D1Q8N7M0 179 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 MRPL30Q8TCC3 161 aaKnown RBP6.06□□□□□ -1.44
EPHA3-203ENST00000494014 LIME1Q9H400 295 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 CHODLQ9H9P2 273 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 NPIPB13A6NJU9 1138 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 NPIPB4C9JG80 1138 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 APOBEC3AP31941 199 aaPredicted RBP6.06□□□□□ -1.44
EPHA3-203ENST00000494014 FGF8P55075 233 aaPredicted RBP6.06□□□□□ -1.44
EPHA3-203ENST00000494014 RHOGP84095 191 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 NNATQ16517 81 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 FAM78BQ5VT40 261 aa6.06□□□□□ -1.44
EPHA3-203ENST00000494014 PRSS41Q7RTY9 318 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms