RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 MEF2CQ06413 473 aaPredicted RBP2.92□□□□□ -1.94
GTF3A-208ENST00000493903 GNA13Q14344 377 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 PAFAH1B3Q15102 231 aaKnown RBP2.92□□□□□ -1.94
GTF3A-208ENST00000493903 SSX1Q16384 188 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 RNF212Q495C1 297 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 LPCAT4Q643R3 524 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 FBXL22Q6P050 247 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 TTC33Q6PID6 262 aaPredicted RBP2.92□□□□□ -1.94
GTF3A-208ENST00000493903 CASP12Q6UXS9 341 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 SPNS3Q6ZMD2 512 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 PRNTQ86SH4 94 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 GALNT10Q86SR1 603 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 CPNE9Q8IYJ1 553 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 C10orf67Q8IYJ2 551 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 ORMDL3Q8N138 153 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 SLC25A45Q8N413 288 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 OR6K3Q8NGY3 331 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 C17orf50Q8WW18 174 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 ESR2Q92731 530 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 PTH2Q96A98 100 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 PPP1R14BQ96C90 147 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 PACRGQ96M98 296 aaPredicted RBP2.92□□□□□ -1.94
GTF3A-208ENST00000493903 ASB8Q9H765 288 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 ZNF355PQ9NSJ1 428 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 PRR34Q9NV39 138 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 DMAC2Q9NW81 257 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 ENOPH1Q9UHY7 261 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 TP53TG3Q9ULZ0 132 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.92□□□□□ -1.94
GTF3A-208ENST00000493903 SNX10Q9Y5X0 201 aa2.92□□□□□ -1.94
GTF3A-208ENST00000493903 PLXNB2O15031 1838 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 RFX7Q2KHR2 1363 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 IGHV2-26A0A0B4J1V2 119 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 CXCR6O00574 342 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 PFDN6O15212 129 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 ZNF207O43670 478 aaKnown RBP2.91□□□□□ -1.94
GTF3A-208ENST00000493903 COX7A2P2O60397 106 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 EPPINO95925 133 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 ASS1P00966 412 aaKnown RBP2.91□□□□□ -1.94
GTF3A-208ENST00000493903 IGLV3-25P01717 112 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 CD74P04233 296 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 CD99P14209 185 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 IL1RNP18510 177 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 PYCR1P32322 319 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 S100A5P33763 92 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 AP2S1P53680 142 aaPredicted RBP2.91□□□□□ -1.94
GTF3A-208ENST00000493903 GTF2BQ00403 316 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 ZNF235Q14590 738 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 DEFB116Q30KQ4 102 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 SAXO2Q658L1 398 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 MORN3Q6PF18 240 aaPredicted RBP2.91□□□□□ -1.94
GTF3A-208ENST00000493903 LINC01551Q86U37 167 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 NT5DC3Q86UY8 548 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 ZNF584Q8IVC4 421 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 MKXQ8IYA7 352 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 ZNF555Q8NEP9 628 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 TBL1YQ9BQ87 522 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 NDFIP1Q9BT67 221 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 EBPLQ9BY08 206 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 MRPS26Q9BYN8 205 aaKnown RBP2.91□□□□□ -1.94
GTF3A-208ENST00000493903 ZNF331Q9NQX6 463 aaPredicted RBP2.91□□□□□ -1.94
GTF3A-208ENST00000493903 FAM206AQ9NX38 181 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 RBM12B-AS1Q9P1G2 102 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 NEU3Q9UQ49 428 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 LOC285556D6RIA3 1793 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 PTPRFP10586 1907 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 PHIPQ8WWQ0 1821 aa2.91□□□□□ -1.94
GTF3A-208ENST00000493903 LOC102724200A0A096LPH7 203 aaPredicted RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 CENPVL3A0A0U1RRI6 287 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 A8MWL6 223 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 C8orf87E5RJ46 101 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 H3BP45 60 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 TMX2-CTNND1H3BSU7 103 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 MAGEB4O15481 346 aaPredicted RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 TCF21O43680 179 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 ATP5HO75947 161 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 CYB5R3P00387 301 aaPredicted RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 ISG15P05161 165 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 ZNF7P17097 686 aaPredicted RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 NELFEP18615 380 aaKnown RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 IMPA1P29218 277 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 IFNGR2P38484 337 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 OPRK1P41145 380 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 ELOCQ15369 112 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 FKBP1CQ5VVH2 108 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 LRRN1Q6UXK5 716 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 LINC00596Q86U02 117 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 GATD1Q8NB37 220 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 CCDC112Q8NEF3 446 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 OR8A1Q8NGG7 326 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 OR5H2Q8NGV7 314 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 FAM57AQ8TBR7 257 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 SRSF12Q8WXF0 261 aaKnown RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 CDX2Q99626 313 aaPredicted RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 PRSS27Q9BQR3 290 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 CCDC94Q9BW85 323 aaPredicted RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 CHST5Q9GZS9 411 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms