RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 IGFBP7Q16270 282 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 WDR73Q6P4I2 378 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 Q6ZS49 121 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 ZADH2Q8N4Q0 377 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 NEK7Q8TDX7 302 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 TAAR6Q96RI8 345 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 PKIBQ9C010 78 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 WFDC1Q9HC57 220 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 Q9N2K0 584 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 SLC2A9Q9NRM0 540 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 DLL3Q9NYJ7 618 aa11.72□□□□□ -0.53
VCP-207ENST00000493886 RCL1Q9Y2P8 373 aaKnown RBP11.72□□□□□ -0.53
VCP-207ENST00000493886 RIF1Q5UIP0 2472 aaKnown RBP11.71□□□□□ -0.53
VCP-207ENST00000493886 NXPH3O95157 252 aa11.71□□□□□ -0.53
VCP-207ENST00000493886 AADACP22760 399 aa11.71□□□□□ -0.53
VCP-207ENST00000493886 UCP3P55916 312 aa11.71□□□□□ -0.53
VCP-207ENST00000493886 ERVS71-1P61550 626 aa11.71□□□□□ -0.53
VCP-207ENST00000493886 HERV-K104P61576 105 aa11.71□□□□□ -0.53
VCP-207ENST00000493886 LINC00596Q86U02 117 aa11.71□□□□□ -0.53
VCP-207ENST00000493886 TAAR5O14804 337 aa11.71□□□□□ -0.54
VCP-207ENST00000493886 PHF1O43189 567 aaPredicted RBP11.71□□□□□ -0.54
VCP-207ENST00000493886 JTBO76095 146 aa11.71□□□□□ -0.54
VCP-207ENST00000493886 SRSF7Q16629 238 aaKnown RBP eCLIP11.71□□□□□ -0.54
VCP-207ENST00000493886 ACSF3Q4G176 576 aaPredicted RBP11.71□□□□□ -0.54
VCP-207ENST00000493886 FAM58AQ8N1B3 248 aa11.71□□□□□ -0.54
VCP-207ENST00000493886 GALNT14Q96FL9 552 aa11.71□□□□□ -0.54
VCP-207ENST00000493886 TMEM208Q9BTX3 173 aa11.71□□□□□ -0.54
VCP-207ENST00000493886 EIF5A2Q9GZV4 153 aaKnown RBP11.71□□□□□ -0.54
VCP-207ENST00000493886 J3QT63 122 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 M0R036 132 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 DLEU1O43261 78 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 RHBDL1O75783 438 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 NBL1P41271 181 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 TMEM187Q14656 261 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 C17orf78Q8N4C9 275 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 RNASE8Q8TDE3 154 aaKnown RBP11.7□□□□□ -0.54
VCP-207ENST00000493886 RTL8AQ9BWD3 113 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 ZNF292O60281 2723 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 EREGO14944 169 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 PPYP01298 95 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 CD5P06127 495 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 COX5AP20674 150 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 OMGP23515 440 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 CAMLGP49069 296 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 FOXF2Q12947 444 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 SUMF2Q8NBJ7 301 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 SLC25A40Q8TBP6 338 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 TUBD1Q9UJT1 453 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 CACNA1GO43497 2377 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 AHRRA9YTQ3 701 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 UCP2P55851 309 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 OR1J1Q8NGS3 322 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 SYT3Q9BQG1 590 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 TOLLIPQ9H0E2 274 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 TMPRSS5Q9H3S3 457 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 PARP11Q9NR21 331 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 ZDHHC8Q9ULC8 765 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 FBXO7Q9Y3I1 522 aa11.7□□□□□ -0.54
VCP-207ENST00000493886 SCTP09683 121 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 DVL1P1P54792 670 aaPredicted RBP11.69□□□□□ -0.54
VCP-207ENST00000493886 AWAT1Q58HT5 328 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 WDR86Q86TI4 376 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 WDR31Q8NA23 367 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 COLCA2A8K830 154 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 HS3ST1O14792 307 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 ALKBH6Q3KRA9 238 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
VCP-207ENST00000493886 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
VCP-207ENST00000493886 RDH5Q92781 318 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 DKK4Q9UBT3 224 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 KIAA2026Q5HYC2 2103 aa11.69□□□□□ -0.54
VCP-207ENST00000493886 TRAV24A0A0B4J272 114 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 KIR2DS1A0A191URI9 304 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 LRP5LA4QPB2 252 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 AGFG2O95081 481 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 IGKV3-15P01624 115 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 TK1P04183 234 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 OR8U8P0C7N1 319 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 ZNF44P15621 663 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 KIR2DS4P43632 304 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 GAMTQ14353 236 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 KIR2DS1Q14954 304 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 IGFL3Q6UXB1 125 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 CCDC71LQ8N9Z2 235 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 BOD1Q96IK1 185 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 TP53RKQ96S44 253 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 PLSCR4Q9NRQ2 329 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 DSPP15924 2871 aaKnown RBP11.68□□□□□ -0.54
VCP-207ENST00000493886 A6NLC8 198 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 IQCF6A8MYZ5 107 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 TRDCB7Z8K6 153 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 E5RGE8 158 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 CEBPGP53567 150 aa11.68□□□□□ -0.54
VCP-207ENST00000493886 PSG7Q13046 419 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms