RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 KCNK7Q9Y2U2 307 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 DLL1O00548 723 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 OR2A4O95047 310 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 CEACAM5P06731 702 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 MDKP21741 143 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-221ENST00000493795 RPL27AP46776 148 aaKnown RBP6.88□□□□□ -1.31
BRCA1-221ENST00000493795 KRTCAP3Q53RY4 240 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 TMEM177Q53S58 311 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SH2D5Q6ZV89 423 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 CYB561D1Q8N8Q1 229 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 NEUROG1Q92886 237 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 WDR34Q96EX3 536 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 OR2A7Q96R45 310 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 LRRC61Q9BV99 259 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SF3B5Q9BWJ5 86 aaKnown RBP6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SMOC1Q9H4F8 434 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 CAMTA1Q9Y6Y1 1673 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 A0A1B0GTH9 108 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SOCS1O15524 211 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 GDF9O60383 454 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 EML2O95834 649 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 PCGF1Q9BSM1 259 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 ZDHHC8Q9ULC8 765 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 ASB1Q9Y576 335 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 TRBV9A0A0B4J1U6 114 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 LMO7DNF2Z398 122 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 PLAUP00749 431 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 TRGC2P03986 189 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 TYMSP04818 313 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SAMD13Q5VXD3 122 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SPEM1Q8N4L4 309 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 DMRTA2Q96SC8 542 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 TBL2Q9Y4P3 447 aaKnown RBP6.88□□□□□ -1.31
BRCA1-221ENST00000493795 CCL27Q9Y4X3 112 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 PEAK1Q9H792 1746 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 TGIF2-C20orf24A0A0A6YYL0 155 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TRAV21A0A0B4J279 112 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PRRT4C9JH25 899 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 K7N7A8 449 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 GPX1P07203 203 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PF4V1P10720 104 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 LSM6P62312 80 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 FAM106AQ4KMX7 169 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 SPNS2Q8IVW8 549 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TTC9CQ8N5M4 171 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 LPAR2Q9HBW0 351 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PSMB11A5LHX3 300 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PGPA6NDG6 321 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TMEM250H0YL14 139 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PATE4P0C8F1 98 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 Q5PR19 223 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TMEM170BQ5T4T1 132 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TMEM174Q8WUU8 243 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TMEM171Q8WVE6 324 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 NEU1Q99519 415 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 AICDAQ9GZX7 198 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 IGHV3OR15-7A0A075B7D8 119 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 C19orf67A6NJJ6 358 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 LINC00869P0C866 280 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PRF1P14222 555 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 MMP16P51512 607 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 FAM74A4Q5TZK3 123 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 ADAD2Q8NCV1 583 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PGLYRP3Q96LB9 341 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 SLC6A13Q9NSD5 602 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TINAGQ9UJW2 476 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TRAV30A0A087WSZ9 112 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 H7C1H1 209 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 GAPDHP04406 335 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 HSPB1P04792 205 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 CD300LDQ6UXZ3 194 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 C17orf47Q8NEP4 570 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 VSTM2LQ96N03 204 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 OR51M1Q9H341 326 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 FSCN3Q9NQT6 498 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF205O95201 554 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 ERGP11308 486 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 FGF5P12034 268 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 CNTFRP26992 372 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 SRIP30626 198 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 REG1BP48304 166 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PRICKLE4Q2TBC4 344 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 C10orf111Q8N326 155 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 PDFQ9HBH1 243 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 TMEM160Q9NX00 188 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 MRM2Q9UI43 246 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 GOLGA4Q13439 2230 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 XRN1Q8IZH2 1706 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 ARHGEF28Q8N1W1 1705 aaKnown RBP6.87□□□□□ -1.31
BRCA1-221ENST00000493795 ANKRD26Q9UPS8 1709 aa6.87□□□□□ -1.31
BRCA1-221ENST00000493795 SPTY2D1-AS1A0A0U1RR47 76 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 METTL12A8MUP2 240 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 TSPAN2O60636 221 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 AGFG2O95081 481 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 MPZL1O95297 269 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 CA1P00915 261 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-221ENST00000493795 ASAH2BP0C7U1 165 aa6.86□□□□□ -1.31
BRCA1-221ENST00000493795 CTLA4P16410 223 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms