RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 IGKV1D-13A0A0B4J2D9 117 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 A8MXK9 166 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 SPINT2O43291 252 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 DHFRP00374 187 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 IGHV2-5P01817 119 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 CTSDP07339 412 aaPredicted RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 IGKV1-13P0DP09 117 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 ANXA7P20073 488 aaKnown RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 NFYAP23511 347 aaPredicted RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 UBE2MP61081 183 aaKnown RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 DHODHQ02127 395 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 GNMTQ14749 295 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 TMEM200BQ69YZ2 307 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 FAHD2BQ6P2I3 314 aaPredicted RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 GLDNQ6ZMI3 551 aaPredicted RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 SLC25A42Q86VD7 318 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 CADM3Q8N126 398 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 LY6G5BQ8NDX9 201 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 OR10A7Q8NGE5 316 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 OR52M1Q8NGK5 317 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 UBALD1Q8TB05 177 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 FAM216AQ8WUB2 273 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 CHAC2Q8WUX2 184 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 TMEM230Q96A57 120 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 DACT3Q96B18 629 aaPredicted RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 FAHD2AQ96GK7 314 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 SCGB3A2Q96PL1 93 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 RTBDNQ9BSG5 229 aaPredicted RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 RSRP1Q9BUV0 290 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 TMPRSS13Q9BYE2 586 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 BPESC1Q9GZL8 116 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 PARP12Q9H0J9 701 aaKnown RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 BEX4Q9NWD9 120 aaPredicted RBP10.43□□□□□ -0.74
VPS52-220ENST00000493674 SLC23A1Q9UHI7 598 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 JPT1Q9UK76 154 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 ALG5Q9Y673 324 aa10.43□□□□□ -0.74
VPS52-220ENST00000493674 KIAA1324LA8MWY0 1029 aaPredicted RBP10.42□□□□□ -0.74
VPS52-220ENST00000493674 ITGB1BP1O14713 200 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 ZNF728P0DKX0 622 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 ZBTB25P24278 435 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 IL2RGP31785 369 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 BCAP31P51572 246 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 RAB25P57735 213 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 HERV-K104P61576 105 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 LMO4P61968 165 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 CARTPTQ16568 116 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 LRRC75A-AS1Q8N1F1 130 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 IL1F10Q8WWZ1 152 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 FAM168AQ92567 244 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 MBD6Q96DN6 1003 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 ZNF486Q96H40 463 aaPredicted RBP10.42□□□□□ -0.74
VPS52-220ENST00000493674 ZNF714Q96N38 554 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 RDH8Q9NYR8 311 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 ZNF69Q9UC07 566 aa10.42□□□□□ -0.74
VPS52-220ENST00000493674 RPUSD1Q9UJJ7 312 aaKnown RBP10.42□□□□□ -0.74
VPS52-220ENST00000493674 MAP1AP78559 2803 aaPredicted RBP10.42□□□□□ -0.74
VPS52-220ENST00000493674 A0A0A6YYJ9 748 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 MEX3AA1L020 520 aaKnown RBP10.41□□□□□ -0.74
VPS52-220ENST00000493674 FAM172BPA6NC97 362 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 C17orf98A8MV24 154 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 YPEL1O60688 119 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 RBP4P02753 201 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 RLN1P04808 185 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 DSCR9P59020 149 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 TAS2R31P59538 309 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 RND3P61587 244 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 BAMBIQ13145 260 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 MSMO1Q15800 293 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 FAM53AQ6NSI3 398 aaPredicted RBP10.41□□□□□ -0.74
VPS52-220ENST00000493674 HEPN1Q6WQI6 88 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 SLC38A6Q8IZM9 456 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 PRR18Q8N4B5 295 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 C11orf42Q8N5U0 333 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 ADAD2Q8NCV1 583 aaKnown RBP10.41□□□□□ -0.74
VPS52-220ENST00000493674 ZNF439Q8NDP4 499 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 OR52L2PQ8NGH6 319 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 CLDND2Q8NHS1 167 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 RFESDQ8TAC1 157 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 ZFAND1Q8TCF1 268 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 H1FXQ92522 213 aaKnown RBP10.41□□□□□ -0.74
VPS52-220ENST00000493674 DMRTB1Q96MA1 342 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 YPEL2Q96QA6 119 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 PIMREGQ9BSJ6 248 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 GAL3ST2Q9H3Q3 398 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 GFOD1Q9NXC2 390 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 IDI2-AS1Q9NZ38 188 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 CELSR1Q9NYQ6 3014 aa10.41□□□□□ -0.74
VPS52-220ENST00000493674 hCG_2014768A0A024R1R8 64 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 A0A087X0M5 115 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 A0A1B0GX30 115 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 SNRPGP15A8MWD9 76 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 C22orf46C9J442 243 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 HSPA12AO43301 675 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 MMP23AO75900 390 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 IGLV2-14P01704 120 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 CCL3L1P16619 93 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 GNRHRP30968 328 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 PPP1CCP36873 323 aaKnown RBP10.4□□□□□ -0.74
VPS52-220ENST00000493674 CEACAM6P40199 344 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 FXYD4P59646 89 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms