RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 IL34Q6ZMJ4 242 aa9.06□□□□□ -0.96
PHACTR4-204ENST00000493669 OR2C3Q8N628 320 aa9.06□□□□□ -0.96
PHACTR4-204ENST00000493669 NINJ1Q92982 152 aa9.06□□□□□ -0.96
PHACTR4-204ENST00000493669 NCOR1P1Q9H4R4 102 aa9.06□□□□□ -0.96
PHACTR4-204ENST00000493669 FAM212BQ9NTI7 297 aaPredicted RBP9.06□□□□□ -0.96
PHACTR4-204ENST00000493669 ASF1BQ9NVP2 202 aa9.06□□□□□ -0.96
PHACTR4-204ENST00000493669 LOC400499M0QZD8 3231 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 ATP6V1G2-DDX39BF2Z307 99 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 PITX3O75364 302 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 HBZP02008 142 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 BLOC1S1P78537 153 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 AESQ08117 197 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 TMEM108Q6UXF1 575 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 CD177Q8N6Q3 437 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 OR1S2Q8NGQ3 325 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 OR51H1Q8NH63 302 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 OR1L1Q8NH94 360 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 ERGIC1Q969X5 290 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 SNX22Q96L94 193 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 OR2V2Q96R30 315 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 LYRM2Q9NU23 88 aaPredicted RBP9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 KCNS2Q9ULS6 477 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 ZNF737O75373 536 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 OR8U9P0C7N5 309 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 SEC11BP0C7V7 166 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 PSG2P11465 335 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 PTAFRP25105 342 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 CCKARP32238 428 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 TMPRSS3P57727 454 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 VAMP2P63027 116 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 HTD2P86397 168 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 BAXQ07812 192 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 DRAM1Q8N682 238 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 OR8U1Q8NH10 309 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 GINS3Q9BRX5 216 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 MMP26Q9NRE1 261 aa9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 HEATR1Q9H583 2144 aaKnown RBP9.05□□□□□ -0.96
PHACTR4-204ENST00000493669 ZNF705EA8MWA4 302 aaPredicted RBP9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 MGST3O14880 152 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 LHBP01229 141 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 ADH4P08319 380 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 EWSR1Q01844 656 aaKnown RBP eCLIP9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 GCSAMQ8N6F7 178 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 IL19Q9UHD0 177 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 SPINT2O43291 252 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 EGR1P18146 543 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 TNFSF4P23510 183 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 NHLH1Q02575 133 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 CR1LQ2VPA4 569 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 ALKBH2Q6NS38 261 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 GPHA2Q96T91 129 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 PARP11Q9NR21 331 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 PPP1R3CQ9UQK1 317 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 AKAP13Q12802 2813 aa9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 CHD3Q12873 2000 aaKnown RBP9.04□□□□□ -0.96
PHACTR4-204ENST00000493669 IGKV1D-17A0A075B6S4 117 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 WRBO00258 174 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 GZMHP20718 246 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 POLR2GP62487 172 aaKnown RBP eCLIP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 CATR1Q13166 79 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 ZNF266Q14584 549 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 MRGPRDQ8TDS7 321 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 FAM222BQ8WU58 562 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 GPR146Q96CH1 333 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 SNRNP40Q96DI7 357 aaKnown RBP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 DIRC2Q96SL1 478 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 MRPL37Q9BZE1 423 aaKnown RBP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 NARFLQ9H6Q4 476 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 PRR14LQ5THK1 2151 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 PRRC2CQ9Y520 2896 aaKnown RBP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 PTPRZ1P23471 2315 aaPredicted RBP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 SSSCA1O60232 199 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 ATG12O94817 140 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 GLIPR1P48060 266 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 RAB5CP51148 216 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 TUSC1Q2TAM9 212 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 CXorf66Q5JRM2 361 aaPredicted RBP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 MOGAT3Q86VF5 341 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 Q8TCH9 128 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 RAB40CQ96S21 281 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 SMIM3Q9BZL3 60 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 RAB9BQ9NP90 201 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 METRNQ9UJH8 293 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 RNF115Q9Y4L5 304 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 FRYQ5TBA9 3013 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 APC2O95996 2303 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 GFRA3O60609 400 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 SPP1P10451 314 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 ZNF585BQ52M93 769 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 VHLLQ6RSH7 139 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 TMEM252Q8N6L7 170 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 OR13A1Q8NGR1 328 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 RNASE11Q8TAA1 199 aaKnown RBP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 ITLN1Q8WWA0 313 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 PARP12Q9H0J9 701 aaKnown RBP9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 COA4Q9NYJ1 87 aa9.03□□□□□ -0.96
PHACTR4-204ENST00000493669 CUL9Q8IWT3 2517 aa9.02□□□□□ -0.96
PHACTR4-204ENST00000493669 C15orf65H3BRN8 121 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms