RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TMEM185AQ8NFB2 350 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 SDHAF2Q9NX18 166 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 F12P00748 615 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 SELLP14151 372 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 HLA-GP17693 338 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 GLIPR1P48060 266 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 EFNA4P52798 201 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 HLA-DRB3P79483 266 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 ZNF660Q6AZW8 331 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 ALKAL2Q6UX46 152 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 LYG2Q86SG7 212 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 COQ8AQ8NI60 647 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DSCAML1Q8TD84 2053 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 CXorf58Q96LI9 332 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 CCL19Q99731 98 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 A0A0D9SG52 128 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 A0A1B0GW55 424 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 TNFRSF13BO14836 293 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 SCTP09683 121 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DUX4L2P0CJ85 424 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DUX4L3P0CJ86 424 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DUX4L4P0CJ87 422 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DUX4L5P0CJ88 424 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DUX4L6P0CJ89 424 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DUX4L7P0CJ90 424 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 OR5H8P0DN80 308 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 SLC25A4P12235 298 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 ZP3P21754 424 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 LIN54Q6MZP7 749 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 FAHD2BQ6P2I3 314 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DUX4L9Q6RFH8 374 aaPredicted RBP11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 TPRX1Q8N7U7 411 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 IGFBPL1Q8WX77 278 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 MRGPRFQ96AM1 343 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 FAHD2AQ96GK7 314 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 TIMD4Q96H15 378 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 CHODLQ9H9P2 273 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 DUX4Q9UBX2 424 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 PFDN2Q9UHV9 154 aa11.72□□□□□ -0.53
PDZRN3-210ENST00000492909 TRAV39A0A0B4J263 110 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 ADAM20O43506 726 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 NDUFS7O75251 213 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 SCO1O75880 301 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 IGHV2-70P01814 119 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 HLA-AP01891 365 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 CTXN2P0C2S0 81 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 EDDM3BP56851 147 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 UBA52P62987 128 aaKnown RBP11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 IGSF11Q5DX21 431 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 ZNF546Q86UE3 836 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 OR4A4PQ8NGN8 299 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 TERB2Q8NHR7 220 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 NRGNQ92686 78 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 RAB1CQ92928 201 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 C14orf79Q96F83 325 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 KCNIP1Q9NZI2 227 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 KAAG1Q9UBP8 84 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 SESN1Q9Y6P5 492 aa11.71□□□□□ -0.54
PDZRN3-210ENST00000492909 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 ODAMA1E959 279 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 OR5H14A6NHG9 310 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 GLP1RP43220 463 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 TMEM33P57088 247 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 PPP1R1AQ13522 171 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 LYPD2Q6UXB3 125 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 KCNRGQ8N5I3 272 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 MITD1Q8WV92 249 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 NCOR1P1Q9H4R4 102 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 TAF9BQ9HBM6 251 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 COMMD9Q9P000 198 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 SLC25A10Q9UBX3 287 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 TACC2O95359 2948 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 DOCK11Q5JSL3 2073 aa11.7□□□□□ -0.54
PDZRN3-210ENST00000492909 BET1O15155 118 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 PPIHO43447 177 aaKnown RBP11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 NDUFB3O43676 98 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 NDUFB7P17568 137 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 ZNF345Q14585 488 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 HMGN3Q15651 99 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 AVPI1Q5T686 147 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 C11orf87Q6NUJ2 197 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 TRAT1Q6PIZ9 186 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 DHRS11Q6UWP2 260 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 C5orf24Q7Z6I8 188 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 PDZD9Q8IXQ8 264 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 ZNF565Q8N9K5 539 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 MRGPRDQ8TDS7 321 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 KIRREL1Q96J84 757 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 LURAP1Q96LR2 239 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 ZNF2Q9BSG1 426 aaPredicted RBP11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 PCDHB10Q9UN67 800 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 TNFSF18Q9UNG2 199 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 SETXQ7Z333 2677 aaKnown RBP11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 A8MXK9 166 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 OR2F2O95006 317 aa11.69□□□□□ -0.54
PDZRN3-210ENST00000492909 FCGR2CP31995 323 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms