RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.61e-6■■■■■ 35.4
CCM2-217ENST00000492883 C2CD3Q4AC94 2353 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 NAV3Q8IVL0 2385 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 FAM181BA6NEQ2 426 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 MFNGO00587 321 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 GPR137BO60478 399 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 RAB13P51153 203 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 RORCP51449 518 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 ARHGDIBP52566 201 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 HTD2P86397 168 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 MADCAM1Q13477 382 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 HMGN3Q15651 99 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 LY6EQ16553 131 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 TPTE2P1Q5T6R2 138 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 RPEQ96AT9 228 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 DCSTAMPQ9H295 470 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 DIABLOQ9NR28 239 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
CCM2-217ENST00000492883 VGLL3A8MV65 326 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 RGS11O94810 467 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 MNDAP41218 407 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 Q3ZCU0 254 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 MORN2Q502X0 79 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 CCDC144NLQ6NUI1 221 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 Q6ZPA2 131 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 TOMM40LQ969M1 308 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 KCTD12Q96CX2 325 aaKnown RBP11.28□□□□□ -0.6
CCM2-217ENST00000492883 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 S100A16Q96FQ6 103 aaKnown RBP11.28□□□□□ -0.6
CCM2-217ENST00000492883 OCSTAMPQ9BR26 566 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 COMMD3Q9UBI1 195 aa11.28□□□□□ -0.6
CCM2-217ENST00000492883 TRAV18A0A075B6X5 111 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 OOSP1A8MZH6 123 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 TRDCB7Z8K6 153 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 LY6LH3BQJ8 138 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 YPEL1O60688 119 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 NOL3O60936 208 aaKnown RBP11.27□□□□□ -0.61
CCM2-217ENST00000492883 FCGR3AP08637 254 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 GSTP1P09211 210 aaKnown RBP11.27□□□□□ -0.61
CCM2-217ENST00000492883 SCTP09683 121 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 HKR1P10072 659 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 IL3RAP26951 378 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 BRS3P32247 399 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 PPP1CCP36873 323 aaKnown RBP11.27□□□□□ -0.61
CCM2-217ENST00000492883 DYNLT3P51808 116 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 GNG2P59768 71 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 HLA-DRB3P79483 266 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 GNMTQ14749 295 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 HACD4Q5VWC8 232 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 STEAP3Q658P3 488 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 LINC00311Q8N616 119 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 SAMD12Q8N8I0 201 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 PIFOQ8TCI5 191 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 YPEL2Q96QA6 119 aa11.27□□□□□ -0.61
CCM2-217ENST00000492883 ZNF230Q9UIE0 474 aaPredicted RBP11.27□□□□□ -0.61
CCM2-217ENST00000492883 ELF5Q9UKW6 265 aaPredicted RBP11.27□□□□□ -0.61
CCM2-217ENST00000492883 A0A0A6YYH2 397 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 TMEM235A6NFC5 223 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 A6NJ64 397 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 SLC31A2O15432 143 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 HSPA12AO43301 675 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 KIR2DS4P43632 304 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 RAB7AP51149 207 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 ZNF134P52741 427 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 TMBIM6P55061 237 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 RPL15P61313 204 aaKnown RBP11.26□□□□□ -0.61
CCM2-217ENST00000492883 PITPNAQ00169 270 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 KIR2DS1Q14954 304 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 PNLIPRP3Q17RR3 467 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 ZNF260Q3ZCT1 412 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 CT45A1Q5HYN5 189 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
CCM2-217ENST00000492883 SLC25A48Q6ZT89 311 aaKnown RBP11.26□□□□□ -0.61
CCM2-217ENST00000492883 ZNF439Q8NDP4 499 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 CT45A3Q8NHU0 189 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 RAB2BQ8WUD1 216 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 ACOT12Q8WYK0 555 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 AP3S1Q92572 193 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 TAF15Q92804 592 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCM2-217ENST00000492883 ST6GALNAC5Q9BVH7 336 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 ABCG5Q9H222 651 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.611e-6■■■■□ 24.6
CCM2-217ENST00000492883 SLC23A1Q9UHI7 598 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 PITPNC1Q9UKF7 332 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 TCF19Q9Y242 345 aa11.26□□□□□ -0.61
CCM2-217ENST00000492883 JMJD1CQ15652 2540 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 FABP7O15540 132 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 GAPDHP04406 335 aaKnown RBP11.25□□□□□ -0.61
CCM2-217ENST00000492883 LPLP06858 475 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 ZNF182P17025 639 aaPredicted RBP11.25□□□□□ -0.61
CCM2-217ENST00000492883 ZBTB25P24278 435 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 CD24P25063 80 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 CEACAM6P40199 344 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 FOXL1Q12952 345 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
CCM2-217ENST00000492883 MZT2AQ6P582 158 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms