RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 FAM90A9PA6NNJ1 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 CENPXA8MT69 81 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A12PA8MX19 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A5PA8MXJ8 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 TMEM238C9JI98 176 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 BUB1B-PAK6H3BSN5 160 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 TNFAIP8O95379 198 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 OR2H2O95918 312 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 PF4P02776 101 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A15PP0C7V4 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A13PP0C7W8 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A14PP0C7W9 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 FAM90A24PP0C7X0 464 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 SMIM18P0DKX4 95 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 IGLL1P15814 213 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 ZNF20P17024 532 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 JUNBP17275 347 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-212ENST00000492407 BCL3P20749 454 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 DTYMKP23919 212 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 CDK2P24941 298 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 EPHA2P29317 976 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 PTGFRP43088 359 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 NPBWR2P48146 333 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 PAX5Q02548 391 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 EGFEM1PQ0D2K5 195 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 SLAQ13239 276 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 GPR176Q14439 515 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 ZNF846Q147U1 533 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 ODF4Q2M2E3 257 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 HLA-DRB5Q30154 266 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 ACTBL2Q562R1 376 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 TCTEX1D4Q5JR98 221 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 TPTE2P1Q5T6R2 138 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 MEDAGQ5VYS4 303 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 ETFRF1Q6IPR1 90 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 TMEM65Q6PI78 240 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 SPAG16Q8N0X2 631 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 OSR2Q8N2R0 312 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 TPRX1Q8N7U7 411 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 CLRN3Q8NCR9 226 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 NUDT10Q8NFP7 164 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 OR10H4Q8NGA5 316 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 OR10A7Q8NGE5 316 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 OR2G2Q8NGZ5 317 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 MRGPRDQ8TDS7 321 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 RNF166Q96A37 237 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-212ENST00000492407 ADAT3Q96EY9 351 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-212ENST00000492407 TBX5Q99593 518 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 SLC25A33Q9BSK2 321 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 MCRIP2Q9BUT9 160 aaKnown RBP7.28□□□□□ -1.24
HDAC3-212ENST00000492407 CHST6Q9GZX3 395 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 LINC00574Q9H8X3 128 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC3-212ENST00000492407 ZFP57Q9NU63 452 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 TMEM140Q9NV12 185 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 IMPAD1Q9NX62 359 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 OR6C3Q9NZP0 311 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 NAGKQ9UJ70 344 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 AP4S1Q9Y587 144 aa7.28□□□□□ -1.24
HDAC3-212ENST00000492407 KBTBD11-OT1A0A1B0GTJ5 212 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 ODAMA1E959 279 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 E9PQ18 207 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 J3QRE1 110 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 MMP23AO75900 390 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 CGB3P0DN86 165 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 CGB7P0DN87 165 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 ZNF85Q03923 595 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 ABCA11PQ4W5N1 156 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 COMMD1Q8N668 190 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 OR51D1Q8NGF3 324 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 OR9G1Q8NH87 305 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 HAVCR2Q8TDQ0 301 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 S100ZQ8WXG8 99 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 FGGYQ96C11 551 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 CPNE2Q96FN4 548 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-212ENST00000492407 CLUHP3Q96NS8 147 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 ZNF2Q9BSG1 426 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-212ENST00000492407 FRRS1LQ9P0K9 344 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 GNG8Q9UK08 70 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 GSTK1Q9Y2Q3 226 aa7.27□□□□□ -1.25
HDAC3-212ENST00000492407 AMMECR1Q9Y4X0 333 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-212ENST00000492407 NOTCH3Q9UM47 2321 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 IGKV1-12A0A0C4DH73 117 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 A0A1W2PRX2 142 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 K7EIL1 84 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 M0R129 80 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 SIRPB1O00241 398 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 SLC33A1O00400 549 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-212ENST00000492407 DEGS1O15121 323 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 FGF16O43320 207 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 MPIG6BO95866 241 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 IGKV1D-12P01611 117 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 AMY1AP04745 511 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 AMY2AP04746 511 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 LPLP06858 475 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 CLEC2LP0C7M8 214 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 DUSP1P28562 367 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 BDKRB2P30411 391 aa7.26□□□□□ -1.25
HDAC3-212ENST00000492407 RPL35P42766 123 aaKnown RBP7.26□□□□□ -1.25
HDAC3-212ENST00000492407 GLIPR1P48060 266 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms