RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 C14orf166Q9Y224 244 aaKnown RBP7.98□□□□□ -1.13
USP54-214ENST00000492357 TENM4Q6N022 2769 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 A0A0B4J2A0 478 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 RNF212BA8MTL3 300 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 SDCBPO00560 298 aaPredicted RBP7.97□□□□□ -1.13
USP54-214ENST00000492357 BET1O15155 118 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 ENSAO43768 121 aaKnown RBP7.97□□□□□ -1.13
USP54-214ENST00000492357 NDUFS7O75251 213 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 ZNF205O95201 554 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 LOXL3P58215 753 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 LMO4P61968 165 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 C17orf58Q2M2W7 97 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 AVPI1Q5T686 147 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 FAM71F2Q6NXP2 309 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 FAAP20Q6NZ36 180 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 GLDNQ6ZMI3 551 aaPredicted RBP7.97□□□□□ -1.13
USP54-214ENST00000492357 LINC00311Q8N616 119 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 ZNF525Q8N782 197 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 ZNF596Q8TC21 504 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 GALNT14Q96FL9 552 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 RSRP1Q9BUV0 290 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 BPESC1Q9GZL8 116 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 OR2S2Q9NQN1 319 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 GFOD1Q9NXC2 390 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 RDH8Q9NYR8 311 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 SHPKQ9UHJ6 478 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 KPTNQ9Y664 436 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 COL12A1Q99715 3063 aa7.97□□□□□ -1.13
USP54-214ENST00000492357 LOC105371242A0A075B767 164 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 A0A1B0GVG6 124 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 OR5H14A6NHG9 310 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 GPR31O00270 319 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 ARPC1BO15143 372 aaKnown RBP7.96□□□□□ -1.14
USP54-214ENST00000492357 CREBL2O60519 120 aaPredicted RBP7.96□□□□□ -1.14
USP54-214ENST00000492357 LY6HO94772 140 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 PPIAL4GP0DN37 164 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 ANXA3P12429 323 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 SELLP14151 372 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 GATA3P23771 443 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 SSTR5P35346 364 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 CEACAM6P40199 344 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 DLX6P56179 175 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 RAB25P57735 213 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 SRPXP78539 464 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 HOXA4Q00056 320 aaPredicted RBP7.96□□□□□ -1.14
USP54-214ENST00000492357 TAGLNQ01995 201 aaKnown RBP7.96□□□□□ -1.14
USP54-214ENST00000492357 TATDN3Q17R31 274 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 MORN2Q502X0 79 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 TMEM200BQ69YZ2 307 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 TCF23Q7RTU1 214 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 BVESQ8NE79 360 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 OR2AK2Q8NG84 335 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 OR10V1Q8NGI7 309 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 OR1L1Q8NH94 360 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 CLDND2Q8NHS1 167 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 MARCH1Q8TCQ1 289 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 IL1F10Q8WWZ1 152 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 H1FXQ92522 213 aaKnown RBP7.96□□□□□ -1.14
USP54-214ENST00000492357 MRGPRFQ96AM1 343 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 DACT3Q96B18 629 aaPredicted RBP7.96□□□□□ -1.14
USP54-214ENST00000492357 FXYD6Q9H0Q3 95 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 C19orf12Q9NSK7 152 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 GNG12Q9UBI6 72 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 KCNIP3Q9Y2W7 256 aa7.96□□□□□ -1.14
USP54-214ENST00000492357 A0A1B0GW55 424 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUS4LO95620 317 aaKnown RBP7.95□□□□□ -1.14
USP54-214ENST00000492357 RLN1P04808 185 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 OR4E1P0C645 316 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUX4L2P0CJ85 424 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUX4L3P0CJ86 424 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUX4L4P0CJ87 422 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUX4L5P0CJ88 424 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUX4L6P0CJ89 424 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUX4L7P0CJ90 424 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 PGAM2P15259 253 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 AADACP22760 399 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 COL8A1P27658 744 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 ERVFRD-1P60508 538 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 LOXL1Q08397 574 aaPredicted RBP7.95□□□□□ -1.14
USP54-214ENST00000492357 CARTPTQ16568 116 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 CLEC12BQ2HXU8 276 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 ABCA11PQ4W5N1 156 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUX4L9Q6RFH8 374 aaPredicted RBP7.95□□□□□ -1.14
USP54-214ENST00000492357 ZNF66Q6ZN08 573 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 SLC25A48Q6ZT89 311 aaKnown RBP7.95□□□□□ -1.14
USP54-214ENST00000492357 LDLRAD3Q86YD5 345 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 SGPP2Q8IWX5 399 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 ZNF645Q8N7E2 425 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 TPRX1Q8N7U7 411 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 AGMATQ9BSE5 352 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 SUCNR1Q9BXA5 334 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 SLC5A7Q9GZV3 580 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 MMP28Q9H239 520 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 C5orf66Q9H5L9 145 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 METTL8Q9H825 291 aaKnown RBP7.95□□□□□ -1.14
USP54-214ENST00000492357 PIPOXQ9P0Z9 390 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DUX4Q9UBX2 424 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 SESN1Q9Y6P5 492 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DOPEY2Q9Y3R5 2298 aa7.95□□□□□ -1.14
USP54-214ENST00000492357 DOCK11Q5JSL3 2073 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms