RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 LPLP06858 475 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 CSF1P09603 554 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 FAM106CPP0CH98 169 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 BLVRBP30043 206 aaPredicted RBP19.66■□□□□ 0.74
UPF3A-209ENST00000492270 HES1Q14469 280 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 SLC25A48Q6ZT89 311 aaKnown RBP19.66■□□□□ 0.74
UPF3A-209ENST00000492270 OR2W3Q7Z3T1 314 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 THNSL2Q86YJ6 484 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 SPARTQ8N0X7 666 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 OR51D1Q8NGF3 324 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 RAB9BQ9NP90 201 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 IGHV3-72A0A0B4J1Y9 119 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 IGKV1D-33P01593 117 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 IGKV1-33P01594 117 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 GAPDHP04406 335 aaKnown RBP19.65■□□□□ 0.74
UPF3A-209ENST00000492270 TMEM11P17152 192 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 HNF4GQ14541 408 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 Q3ZCU0 254 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 CT45A1Q5HYN5 189 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 HES5Q5TA89 166 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 MOB3BQ86TA1 216 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 SVOPQ8N4V2 548 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 OR52L2PQ8NGH6 319 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 CT45A3Q8NHU0 189 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 ST6GALNAC6Q969X2 333 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 KCNIP1Q9NZI2 227 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 MOB4Q9Y3A3 225 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 V9GY05 133 aa19.65■□□□□ 0.74
UPF3A-209ENST00000492270 MRPS14O60783 128 aaKnown RBP19.64■□□□□ 0.73
UPF3A-209ENST00000492270 OR10A3P58181 314 aa19.64■□□□□ 0.73
UPF3A-209ENST00000492270 PLA2G7Q13093 441 aa19.64■□□□□ 0.73
UPF3A-209ENST00000492270 TMEM30BQ3MIR4 351 aa19.64■□□□□ 0.73
UPF3A-209ENST00000492270 UBE2UQ5VVX9 321 aa19.64■□□□□ 0.73
UPF3A-209ENST00000492270 CD200R1LQ6Q8B3 271 aa19.64■□□□□ 0.73
UPF3A-209ENST00000492270 RTN4IP1Q8WWV3 396 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-209ENST00000492270 RBMXL1Q96E39 390 aaKnown RBP19.64■□□□□ 0.73
UPF3A-209ENST00000492270 OR2S2Q9NQN1 319 aa19.64■□□□□ 0.73
UPF3A-209ENST00000492270 FOXI3A8MTJ6 420 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-209ENST00000492270 IL3RAP26951 378 aa19.63■□□□□ 0.73
UPF3A-209ENST00000492270 PPP1CCP36873 323 aaKnown RBP19.63■□□□□ 0.73
UPF3A-209ENST00000492270 C9orf152Q5JTZ5 239 aa19.63■□□□□ 0.73
UPF3A-209ENST00000492270 FAM3DQ96BQ1 224 aa19.63■□□□□ 0.73
UPF3A-209ENST00000492270 HDHD3Q9BSH5 251 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-209ENST00000492270 URM1Q9BTM9 101 aaKnown RBP19.63■□□□□ 0.73
UPF3A-209ENST00000492270 PLEKHJ1Q9NW61 149 aa19.63■□□□□ 0.73
UPF3A-209ENST00000492270 RRP15Q9Y3B9 282 aaKnown RBP19.63■□□□□ 0.73
UPF3A-209ENST00000492270 TRDV1A0A1B0GX56 115 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 NAPSAO96009 420 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 PSMB9P28065 219 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 HMGN3Q15651 99 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 NSUN5P1Q3KNT7 163 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 C2orf76Q3KRA6 126 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 MORN2Q502X0 79 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 ZNF554Q86TJ5 538 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 FAM89BQ8N5H3 189 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 CITED2Q99967 270 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-209ENST00000492270 CHMP1AQ9HD42 196 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-209ENST00000492270 AK3Q9UIJ7 227 aa19.62■□□□□ 0.73
UPF3A-209ENST00000492270 TRAV1-2A0A0B4J238 106 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 LDLRAD4O15165 306 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 VEGFCP49767 419 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 C22orf42Q6IC83 251 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 C5orf56Q8N8D9 126 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 SETD6Q8TBK2 473 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 STEAP1Q9UHE8 339 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 JPT1Q9UK76 154 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 LRRC42Q9Y546 428 aa19.61■□□□□ 0.73
UPF3A-209ENST00000492270 NOTCH1P46531 2555 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 PLXNB1O43157 2135 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 TMEM272A0A1B0GTI8 110 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 ZNF736B4DX44 427 aaPredicted RBP19.6■□□□□ 0.73
UPF3A-209ENST00000492270 M0QZK8 103 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 ZNF137PP52743 207 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 TMEM50BP56557 158 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 EBI3Q14213 229 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 ZNF880Q6PDB4 577 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 C10orf99Q6UWK7 81 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 IZUMO1Q8IYV9 350 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 OR5AU1Q8NGC0 362 aa19.6■□□□□ 0.73
UPF3A-209ENST00000492270 EAF1Q96JC9 268 aaPredicted RBP19.6■□□□□ 0.73
UPF3A-209ENST00000492270 YTHDF1Q9BYJ9 559 aaKnown RBP19.6■□□□□ 0.73
UPF3A-209ENST00000492270 ADARB2-AS1A8MUL3 147 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 PDCD5O14737 125 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 MYL9P24844 172 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 HTD2P86397 168 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 NR2C2APQ86WQ0 139 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 TGIF2LXQ8IUE1 241 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 GALMQ96C23 342 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 ARHGAP5-AS1Q96IT6 56 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 ABHD14AQ9BUJ0 271 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 PECRQ9BY49 303 aa19.59■□□□□ 0.73
UPF3A-209ENST00000492270 A0A0B4J203 849 aa19.58■□□□□ 0.72
UPF3A-209ENST00000492270 SMIM30A4D0T7 59 aa19.58■□□□□ 0.72
UPF3A-209ENST00000492270 PSMD7P51665 324 aa19.58■□□□□ 0.72
UPF3A-209ENST00000492270 PLAC9Q5JTB6 97 aa19.58■□□□□ 0.72
UPF3A-209ENST00000492270 Q8N6K4 173 aa19.58■□□□□ 0.72
UPF3A-209ENST00000492270 IL1F10Q8WWZ1 152 aa19.58■□□□□ 0.72
UPF3A-209ENST00000492270 FCGR1BQ92637 280 aa19.58■□□□□ 0.72
UPF3A-209ENST00000492270 HSF4Q9ULV5 492 aa19.58■□□□□ 0.72
UPF3A-209ENST00000492270 IFITM5A6NNB3 132 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms