RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 OR5D13Q8NGL4 314 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 ZNF837Q96EG3 531 aaPredicted RBP11.09□□□□□ -0.63
SHOX2-205ENST00000490689 CCDC74BQ96LY2 380 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 OR2D2Q9H210 308 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 TMEM9BQ9NQ34 198 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 ZNF581Q9P0T4 197 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 HS3ST3B1Q9Y662 390 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 APC2O95996 2303 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 A0A0J9YW62 118 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 SH2D1BO14796 132 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 SRSF4Q08170 494 aaKnown RBP11.09□□□□□ -0.63
SHOX2-205ENST00000490689 ICAM4Q14773 271 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 RHBDD2Q6NTF9 364 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 SSMEM1Q8WWF3 244 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 MARS2Q96GW9 593 aaKnown RBP11.09□□□□□ -0.63
SHOX2-205ENST00000490689 WBP1LQ9NX94 342 aa11.09□□□□□ -0.63
SHOX2-205ENST00000490689 FOXD3Q9UJU5 478 aaPredicted RBP11.09□□□□□ -0.63
SHOX2-205ENST00000490689 C2CD4DB7Z1M9 353 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 NDUFB4O95168 129 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 APOA2P02652 100 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 RPLP1P05386 114 aaKnown RBP11.08□□□□□ -0.64
SHOX2-205ENST00000490689 IFI6P09912 130 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 GCH1P30793 250 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 OR3A1P47881 315 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 LYSMD4Q5XG99 296 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 CDPF1Q6NVV7 123 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 Q6ZN92 141 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 OR2V1Q8NHB1 315 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 C14orf144Q96I85 54 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 HSPB9Q9BQS6 159 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 NUDT16L1Q9BRJ7 211 aaKnown RBP11.08□□□□□ -0.64
SHOX2-205ENST00000490689 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.08□□□□□ -0.64
SHOX2-205ENST00000490689 K7N7A8 449 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 TIMM8AO60220 97 aaPredicted RBP11.08□□□□□ -0.64
SHOX2-205ENST00000490689 NPIPB7O75200 414 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 HSBP1O75506 76 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 IER3P46695 156 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 CD81P60033 236 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 FOXO1Q12778 655 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 EXT1Q16394 746 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 ZNF506Q5JVG8 444 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 RCC1LQ96I51 464 aaKnown RBP11.08□□□□□ -0.64
SHOX2-205ENST00000490689 TMEM68Q96MH6 324 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 HIST1H2BLQ99880 126 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 DUSP23Q9BVJ7 150 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 FSCN3Q9NQT6 498 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 SLC35D1Q9NTN3 355 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 OR2W1Q9Y3N9 320 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 LOC102724200A0A096LPH7 203 aaPredicted RBP11.08□□□□□ -0.64
SHOX2-205ENST00000490689 RPL36A-HNRNPH2H7BZ11 118 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 NGFP01138 241 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 GNG3P63215 75 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 PSG4Q00888 419 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 LHFPL1Q86WI0 220 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 TMEM183AQ8IXX5 376 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 HIST3H2BBQ8N257 126 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 OR4X1Q8NH49 305 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 GALMQ96C23 342 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 RTL8AQ9BWD3 113 aa11.08□□□□□ -0.64
SHOX2-205ENST00000490689 DENND4CQ5VZ89 1909 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 IGHV1OR15-9A0A0B4J2B8 117 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 OR10J1P30954 320 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 MPLP40238 635 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 PCP4P48539 62 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 APOBEC3DQ96AK3 386 aaPredicted RBP11.07□□□□□ -0.64
SHOX2-205ENST00000490689 NAGKQ9UJ70 344 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 LOC102723971A0A1B0GUV8 181 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 C20orf202A1L168 122 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 HRASP01112 189 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 IGHV2-70P01814 119 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 RAC1P63000 192 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 COL19A1Q14993 1142 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 ANGPTL4Q9BY76 406 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 KLF2Q9Y5W3 355 aaPredicted RBP11.07□□□□□ -0.64
SHOX2-205ENST00000490689 ARL2-SNX15V9GYD0 113 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 GPR179Q6PRD1 2367 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 SPINT2O43291 252 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 MPZP25189 248 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 GPR12P47775 334 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 D2HGDHQ8N465 521 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 OR10G8Q8NGN5 311 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 CLDND2Q8NHS1 167 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 PARLQ9H300 379 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 PSG11Q9UQ72 335 aa11.07□□□□□ -0.64
SHOX2-205ENST00000490689 WIPF3A6NGB9 483 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 PGLYRP1O75594 196 aaPredicted RBP11.06□□□□□ -0.64
SHOX2-205ENST00000490689 IGHMP01871 453 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 FABP6P51161 128 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 STARD6P59095 220 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 ACSM6Q6P461 480 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 TMEM147Q9BVK8 224 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 OR2H1Q9GZK4 316 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 WNK2Q9Y3S1 2297 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 A0A1B0GU03 582 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 FCGR3BO75015 233 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 ZNF253O75346 499 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 GCGP01275 180 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 DNM1P46Q6ZS02 220 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 OR5AU1Q8NGC0 362 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 CIB3Q96Q77 187 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms