RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SLC22A6Q4U2R8 563 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 C19orf54Q5BKX5 351 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 DMKNQ6E0U4 476 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-207ENST00000490609 OR8H1Q8NGG4 311 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 CPNE2Q96FN4 548 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-207ENST00000490609 Q96MT0 163 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 ZNF184Q99676 751 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-207ENST00000490609 TPSG1Q9NRR2 321 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 ZNF256Q9Y2P7 627 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-207ENST00000490609 RPL36Q9Y3U8 105 aaKnown RBP12.06□□□□□ -0.48
COL2A1-207ENST00000490609 WSB1Q9Y6I7 421 aa12.06□□□□□ -0.48
COL2A1-207ENST00000490609 IGHV7-81A0A0B4J1V7 117 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 C3orf84H3BNL1 204 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 LANCL1O43813 399 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 SOX15O60248 233 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 CSTBP04080 98 aaKnown RBP12.05□□□□□ -0.48
COL2A1-207ENST00000490609 MORN2Q502X0 79 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 MINDY2Q8NBR6 621 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 OR1N2Q8NGR9 330 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 GHSRQ92847 366 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 PGLYRP3Q96LB9 341 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 UBE2E2Q96LR5 201 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 ALX4Q9H161 411 aaPredicted RBP12.05□□□□□ -0.48
COL2A1-207ENST00000490609 BABAM2Q9NXR7 383 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 GAR1Q9NY12 217 aaKnown RBP12.05□□□□□ -0.48
COL2A1-207ENST00000490609 FBXO7Q9Y3I1 522 aa12.05□□□□□ -0.48
COL2A1-207ENST00000490609 TRBV5-7A0A0A0MS05 114 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 CIB2O75838 187 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 GTF2F2P13984 249 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 VDAC1P21796 283 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 NDPQ00604 133 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 CASC10Q5T4H9 136 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 STEAP3Q658P3 488 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 OR52L2PQ8NGH6 319 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 DCUN1D4Q92564 292 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 SMIM19Q96E16 107 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 RDH12Q96NR8 316 aa12.04□□□□□ -0.48
COL2A1-207ENST00000490609 MYCBPQ99417 103 aaPredicted RBP12.04□□□□□ -0.48
COL2A1-207ENST00000490609 MBNL3Q9NUK0 354 aaKnown RBP12.04□□□□□ -0.48
COL2A1-207ENST00000490609 A0A1W2PPK0 400 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 ATP6V0E1O15342 81 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 TXNL1O43396 289 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 RRP9O43818 475 aaKnown RBP12.03□□□□□ -0.48
COL2A1-207ENST00000490609 ZNF780AO75290 641 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-207ENST00000490609 CD2P06729 351 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 MYF6P23409 242 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 IL3RAP26951 378 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 RAB9AP51151 201 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 ACTBP60709 375 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 RIPK1Q13546 671 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 C6orf141Q5SZD1 244 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 RAB12Q6IQ22 244 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 GLIPR1L1Q6UWM5 242 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 PRR18Q8N4B5 295 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 ZFP41Q8N8Y5 198 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 MUL1Q969V5 352 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 OR5B12Q96R08 314 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 NABP2Q9BQ15 211 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 MRPL20Q9BYC9 149 aaKnown RBP12.03□□□□□ -0.48
COL2A1-207ENST00000490609 ANKRD60Q9BZ19 345 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 OR51J1Q9H342 316 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 BANF2Q9H503 90 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 ETAA1Q9NY74 926 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 GNG12Q9UBI6 72 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 TRAPPC2LQ9UL33 140 aa12.03□□□□□ -0.48
COL2A1-207ENST00000490609 MCRIP1C9JLW8 97 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 HLA-DRB1P01911 266 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 EGR2P11161 476 aaPredicted RBP12.02□□□□□ -0.49
COL2A1-207ENST00000490609 DCKP27707 260 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 OR3A3P47888 321 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 PPP3R1P63098 170 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 NPBQ8NG41 125 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 MRPL30Q8TCC3 161 aaKnown RBP12.02□□□□□ -0.49
COL2A1-207ENST00000490609 NEK7Q8TDX7 302 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 DLX4Q92988 240 aaPredicted RBP12.02□□□□□ -0.49
COL2A1-207ENST00000490609 Q96M66 194 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 ZNF251Q9BRH9 671 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 CHCHD6Q9BRQ6 235 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 TAF9BQ9HBM6 251 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 PAK1IP1Q9NWT1 392 aaPredicted RBP12.02□□□□□ -0.49
COL2A1-207ENST00000490609 VSIG4Q9Y279 399 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 MRPS28Q9Y2Q9 187 aaKnown RBP12.02□□□□□ -0.49
COL2A1-207ENST00000490609 PEX16Q9Y5Y5 336 aa12.02□□□□□ -0.49
COL2A1-207ENST00000490609 UBE2QL1A1L167 161 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 SPINT2O43291 252 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 OR8U8P0C7N1 319 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 FSTP19883 344 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 BLVRBP30043 206 aaPredicted RBP12.01□□□□□ -0.49
COL2A1-207ENST00000490609 PPP1CCP36873 323 aaKnown RBP12.01□□□□□ -0.49
COL2A1-207ENST00000490609 ZNF616Q08AN1 781 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 MMDQ15546 238 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 Q499Y3 187 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 LAIR2Q6ISS4 152 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 ZFP1Q6P2D0 407 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 ZNF833PQ6ZTB9 187 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 OVCH2Q7RTZ1 564 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 MUC7Q8TAX7 377 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 CASTOR1Q8WTX7 329 aa12.01□□□□□ -0.49
COL2A1-207ENST00000490609 MRPS24Q96EL2 167 aaKnown RBP12.01□□□□□ -0.49
COL2A1-207ENST00000490609 OR14A2Q96R54 314 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms