RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 TOLLIPQ9H0E2 274 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 TMEM133Q9H2Q1 129 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 C7orf69Q9H7B7 122 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 GFOD1Q9NXC2 390 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 GNG12Q9UBI6 72 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 SLC23A1Q9UHI7 598 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 KCNS2Q9ULS6 477 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 CSPG4Q6UVK1 2322 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 OTOGQ6ZRI0 2925 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 BET1O15155 118 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 LANCL1O43813 399 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 YPEL1O60688 119 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 MMP23AO75900 390 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 AKAIN1P0CW23 69 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 OR5H8P0DN80 308 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 NFYBP25208 207 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 HRH1P35367 487 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 DYRK1AQ13627 763 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 HERPUD1Q15011 391 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 BAK1Q16611 211 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 IGSF11Q5DX21 431 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 VAX1Q5SQQ9 334 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 STEAP1BQ6NZ63 245 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 FAHD2BQ6P2I3 314 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-221ENST00000489562 OVCH2Q7RTZ1 564 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 OR13D1Q8NGV5 346 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 UBALD1Q8TB05 177 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 EDARADDQ8WWZ3 215 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 UPRTQ96BW1 309 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 FAHD2AQ96GK7 314 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 YPEL2Q96QA6 119 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 PCGF1Q9BSM1 259 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 EHFQ9NZC4 300 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 ACANP16112 2415 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 TEX15Q9BXT5 2789 aa11.37□□□□□ -0.59
C9orf3-221ENST00000489562 CSMD1Q96PZ7 3565 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 IGKV1-6A0A0C4DH72 117 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 J3QRK9 145 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 ITGB1BP1O14713 200 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 RAB3DO95716 219 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 CD3DP04234 171 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 IFNA6P05013 189 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 FCER2P06734 321 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 KLF9Q13886 244 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-221ENST00000489562 LTC4SQ16873 150 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 ZNF57Q68EA5 555 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-221ENST00000489562 ZNF782Q6ZMW2 699 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-221ENST00000489562 TMEM17Q86X19 198 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 ARRDC1Q8N5I2 433 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 C8orf31Q8N9H6 132 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 TNFRSF14Q92956 283 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 BORCS5Q969J3 196 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 TBX15Q96SF7 602 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 C7orf50Q9BRJ6 194 aaKnown RBP11.36□□□□□ -0.59
C9orf3-221ENST00000489562 SUCNR1Q9BXA5 334 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 CLEC7AQ9BXN2 247 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 TMPRSS13Q9BYE2 586 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 SIRT7Q9NRC8 400 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 ZNF69Q9UC07 566 aa11.36□□□□□ -0.59
C9orf3-221ENST00000489562 IGHV2-26A0A0B4J1V2 119 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 IGHV3-43A0A0B4J1X8 118 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 UPK1BO75841 260 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 PMP2P02689 132 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 IGHV3-43DP0DP04 118 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 CEACAM6P40199 344 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 RAB7AP51149 207 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 TSPAN5P62079 268 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 KRTAP1-1Q07627 177 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 MORN2Q502X0 79 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 H1FOOQ8IZA3 346 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-221ENST00000489562 ABHD12Q8N2K0 398 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 OR11H6Q8NGC7 330 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 OR52L2PQ8NGH6 319 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 OR9G1Q8NH87 305 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 ZNF596Q8TC21 504 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 GIMAP1Q8WWP7 306 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 OR1A1Q9P1Q5 309 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 ZANQ9Y493 2812 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 TLN2Q9Y4G6 2542 aa11.35□□□□□ -0.59
C9orf3-221ENST00000489562 NAP1L6A6NFF2 107 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 CENPXA8MT69 81 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 DISC1C4P0D8 188 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 M0QYG6 137 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 TOR1AO14656 332 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 TUSC2O75896 110 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 HOXB4P17483 251 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-221ENST00000489562 PPP1CCP36873 323 aaKnown RBP11.34□□□□□ -0.59
C9orf3-221ENST00000489562 RFX2P48378 723 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 UBE2E1P51965 193 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 PRRX1P54821 245 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 GNMTQ14749 295 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 DHRS11Q6UWP2 260 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 C5orf24Q7Z6I8 188 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 PNKDQ8N490 385 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 LINC00311Q8N616 119 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 BEND2Q8NDZ0 799 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 OR2AK2Q8NG84 335 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 OR10V1Q8NGI7 309 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 OR4C16Q8NGL9 310 aa11.34□□□□□ -0.59
C9orf3-221ENST00000489562 OR6F1Q8NGZ6 308 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms