RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 SNX29P2Q8IUI4 249 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 TEX29Q8N6K0 151 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 OR4P4Q8NGL7 312 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 MCFD2Q8NI22 146 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 DGCR14Q96DF8 476 aaKnown RBP6.72□□□□□ -1.33
SF1-218ENST00000489544 ST6GALNAC5Q9BVH7 336 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 RIMS4Q9H426 269 aaPredicted RBP6.72□□□□□ -1.33
SF1-218ENST00000489544 ESM1Q9NQ30 184 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 OR2S2Q9NQN1 319 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.72□□□□□ -1.33
SF1-218ENST00000489544 GFOD1Q9NXC2 390 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 GNG12Q9UBI6 72 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 EXTL2Q9UBQ6 330 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 HILPDAQ9Y5L2 63 aa6.72□□□□□ -1.33
SF1-218ENST00000489544 SETD2Q9BYW2 2564 aaPredicted RBP6.72□□□□□ -1.33
SF1-218ENST00000489544 C2CD3Q4AC94 2353 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 A0A087X0M5 115 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 A0A0A6YYH2 397 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 A0A1B0GX30 115 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 A6NHS1 94 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 A6NJ64 397 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 TRDCB7Z8K6 153 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 J3QR06 171 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 ZNF701M0R085 212 aaPredicted RBP6.71□□□□□ -1.34
SF1-218ENST00000489544 TOR1AO14656 332 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 FABP7O15540 132 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 VENTXO95231 258 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 IGLV1-47P01700 117 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 MELTFP08582 738 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 MNDAP41218 407 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 RAB13P51153 203 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 LGALS4P56470 323 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 SSX2Q16385 188 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 PNLIPRP3Q17RR3 467 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 TUSC1Q2TAM9 212 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 HLA-DRB5Q30154 266 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 MIDNQ504T8 468 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 OR52W1Q6IF63 320 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 CNIH2Q6PI25 160 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 TRAT1Q6PIZ9 186 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 C9orf139Q6ZV77 190 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 OR9G1Q8NH87 305 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 TAF15Q92804 592 aaKnown RBP eCLIP6.71□□□□□ -1.34
SF1-218ENST00000489544 ZDHHC16Q969W1 377 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 NXF2Q9GZY0 626 aaKnown RBP6.71□□□□□ -1.34
SF1-218ENST00000489544 SLC23A1Q9UHI7 598 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 FAM96BQ9Y3D0 163 aa6.71□□□□□ -1.34
SF1-218ENST00000489544 JMJD1CQ15652 2540 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 BUB1B-PAK6H3BSN5 160 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 J3QRK9 145 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 BET1O15155 118 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 ST8SIA5O15466 376 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 HOXA3O43365 443 aaPredicted RBP6.7□□□□□ -1.34
SF1-218ENST00000489544 IGHV4-59P01825 116 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 DTYMKP23919 212 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 CD24P25063 80 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 CEACAM6P40199 344 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 REG1BP48304 166 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 BPIFB3P59826 476 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 ARL6IP1Q15041 203 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 MORN2Q502X0 79 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 FBLN7Q53RD9 439 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 CT45A1Q5HYN5 189 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 MOB1BQ7L9L4 216 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 ZNF554Q86TJ5 538 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 ZDHHC22Q8N966 263 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 ZNF439Q8NDP4 499 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 OR10A7Q8NGE5 316 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 OR52M1Q8NGK5 317 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 OR10X1Q8NGY0 326 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 CT45A3Q8NHU0 189 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 GALMQ96C23 342 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 CMTM3Q96MX0 182 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 ABHD1Q96SE0 405 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 MMP28Q9H239 520 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 NDUFA13Q9P0J0 144 aa6.7□□□□□ -1.34
SF1-218ENST00000489544 DNAJC9-AS1A6NH13 148 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 LY6LH3BQJ8 138 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 HSPA12AO43301 675 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 FBP1P09467 338 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 HTR1DP28221 377 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 TNFSF8P32971 234 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 PRSS3P35030 304 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 PRRX1P54821 245 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 HTD2P86397 168 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 PITPNAQ00169 270 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 BAMBIQ13145 260 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 LY6EQ16553 131 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 Q6YL49 198 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 LYG1Q8N1E2 194 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 BEND2Q8NDZ0 799 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 BEST4Q8NFU0 473 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 ZNF596Q8TC21 504 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 GPX8Q8TED1 209 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 ZNF418Q8TF45 676 aaPredicted RBP6.69□□□□□ -1.34
SF1-218ENST00000489544 SNAPC3Q92966 411 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 CREB3L1Q96BA8 519 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 DIRAS2Q96HU8 199 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 ABHD14BQ96IU4 210 aa6.69□□□□□ -1.34
SF1-218ENST00000489544 PRDM13Q9H4Q3 707 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms