RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PIMREGQ9BSJ6 248 aa17.23■□□□□ 0.35
SND1-214ENST00000489417 GHITMQ9H3K2 345 aa17.23■□□□□ 0.35
SND1-214ENST00000489417 GPN1Q9HCN4 374 aaPredicted RBP17.23■□□□□ 0.35
SND1-214ENST00000489417 IDI2-AS1Q9NZ38 188 aa17.23■□□□□ 0.35
SND1-214ENST00000489417 JPT1Q9UK76 154 aa17.23■□□□□ 0.35
SND1-214ENST00000489417 IGHV3-43A0A0B4J1X8 118 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 IGKV1D-13A0A0B4J2D9 117 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 NDUFS8O00217 210 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 OR4E1P0C645 316 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 IGHV3-43DP0DP04 118 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 IGKV1-13P0DP09 117 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 TMEM30BQ3MIR4 351 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 LPCAT3Q6P1A2 487 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 CLEC2AQ6UVW9 174 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 OR10V1Q8NGI7 309 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 SECTM1Q8WVN6 248 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 ZNF714Q96N38 554 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 RSRP1Q9BUV0 290 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 SLC5A7Q9GZV3 580 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 PARP12Q9H0J9 701 aaKnown RBP17.22■□□□□ 0.35
SND1-214ENST00000489417 GNG12Q9UBI6 72 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 ZNF221Q9UK13 617 aa17.22■□□□□ 0.35
SND1-214ENST00000489417 CCL3L1P16619 93 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 OMGP23515 440 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 PPP1CCP36873 323 aaKnown RBP17.21■□□□□ 0.35
SND1-214ENST00000489417 LUMP51884 338 aaPredicted RBP17.21■□□□□ 0.35
SND1-214ENST00000489417 GNB2P62879 340 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 CBX3Q13185 183 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 C4orf46Q504U0 113 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 FAM53AQ6NSI3 398 aaPredicted RBP17.21■□□□□ 0.35
SND1-214ENST00000489417 FAHD2BQ6P2I3 314 aaPredicted RBP17.21■□□□□ 0.35
SND1-214ENST00000489417 C10orf105Q8TEF2 133 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 TMEM230Q96A57 120 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 FAHD2AQ96GK7 314 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 OR51J1Q9H342 316 aa17.21■□□□□ 0.35
SND1-214ENST00000489417 IGHV2-5P01817 119 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 AKR1C4P17516 323 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 LOXL3P58215 753 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 UBE2MP61081 183 aaKnown RBP17.21■□□□□ 0.34
SND1-214ENST00000489417 ABCA11PQ4W5N1 156 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 ESCO2Q56NI9 601 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 PRAMEF5Q5TYX0 476 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 LDLRAD3Q86YD5 345 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 OR52B4Q8NGK2 314 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 C8orf46Q8TAG6 207 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 ZNF486Q96H40 463 aaPredicted RBP17.21■□□□□ 0.34
SND1-214ENST00000489417 SSBP3Q9BWW4 388 aaPredicted RBP17.21■□□□□ 0.34
SND1-214ENST00000489417 GFOD1Q9NXC2 390 aa17.21■□□□□ 0.34
SND1-214ENST00000489417 RPUSD1Q9UJJ7 312 aaKnown RBP17.21■□□□□ 0.34
SND1-214ENST00000489417 FASNP49327 2511 aaKnown RBP17.2■□□□□ 0.34
SND1-214ENST00000489417 SNRPGP15A8MWD9 76 aa17.2■□□□□ 0.34
SND1-214ENST00000489417 YPEL1O60688 119 aa17.2■□□□□ 0.34
SND1-214ENST00000489417 DSCR9P59020 149 aa17.2■□□□□ 0.34
SND1-214ENST00000489417 PPP1R1AQ13522 171 aa17.2■□□□□ 0.34
SND1-214ENST00000489417 OR10A7Q8NGE5 316 aa17.2■□□□□ 0.34
SND1-214ENST00000489417 CLDND2Q8NHS1 167 aa17.2■□□□□ 0.34
SND1-214ENST00000489417 YPEL2Q96QA6 119 aa17.2■□□□□ 0.34
SND1-214ENST00000489417 BEX4Q9NWD9 120 aaPredicted RBP17.2■□□□□ 0.34
SND1-214ENST00000489417 RBM7Q9Y580 266 aaKnown RBP17.2■□□□□ 0.34
SND1-214ENST00000489417 DSCAML1Q8TD84 2053 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 KIAA2026Q5HYC2 2103 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 VWC2LB2RUY7 222 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 PHF1O43189 567 aaPredicted RBP17.19■□□□□ 0.34
SND1-214ENST00000489417 CREBL2O60519 120 aaPredicted RBP17.19■□□□□ 0.34
SND1-214ENST00000489417 RGS11O94810 467 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 DNASE1P24855 282 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 GNRHRP30968 328 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 DLX6P56179 175 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 DHODHQ02127 395 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 MORN2Q502X0 79 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 TMEM128Q5BJH2 165 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 ZNF626Q68DY1 528 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 OR52M1Q8NGK5 317 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 ZNF431Q8TF32 576 aaPredicted RBP17.19■□□□□ 0.34
SND1-214ENST00000489417 CCL28Q9NRJ3 127 aa17.19■□□□□ 0.34
SND1-214ENST00000489417 PPIAL4CA0A0B4J2A2 164 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 A0A1W2PPH5 198 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 GPR31O00270 319 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 HSD17B6O14756 317 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 MMP23AO75900 390 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 OR8U9P0C7N5 309 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 PPIAL4GP0DN37 164 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 NFYBP25208 207 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 PIGPP57054 158 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 DHRS2Q13268 280 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 C11orf91Q3C1V1 193 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 PHLDA2Q53GA4 152 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 HEPN1Q6WQI6 88 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 LYG2Q86SG7 212 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 CCDC71LQ8N9Z2 235 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 LY6G5BQ8NDX9 201 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 OR8U1Q8NH10 309 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 CHAC2Q8WUX2 184 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 EDARADDQ8WWZ3 215 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 SLC2A9Q9NRM0 540 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 KCNS2Q9ULS6 477 aa17.18■□□□□ 0.34
SND1-214ENST00000489417 C9orf170A2RU37 121 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 HMX3A6NHT5 357 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 C22orf46C9J442 243 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 HLA-AP01891 365 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms