RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 JPT1Q9UK76 154 aa8.3□□□□□ -1.08
USP11-211ENST00000489111 IGHV3-43A0A0B4J1X8 118 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 IGKV1D-13A0A0B4J2D9 117 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 A0A1W2PPH5 198 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 C9orf170A2RU37 121 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 F2RL2O00254 374 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 GPR31O00270 319 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 HSD17B6O14756 317 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 GPR37O15354 613 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 IFNA2P01563 188 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 HEXAP06865 529 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 OR8U9P0C7N5 309 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 IGHV3-43DP0DP04 118 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 IGKV1-13P0DP09 117 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 ANXA3P12429 323 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 CD34P28906 385 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 ATP5J2P56134 94 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 PIGPP57054 158 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 FCN2Q15485 313 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 C12orf45Q8N5I9 185 aaPredicted RBP8.29□□□□□ -1.08
USP11-211ENST00000489111 ZNF525Q8N782 197 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 UXS1Q8NBZ7 420 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 OR8U1Q8NH10 309 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 COQ8AQ8NI60 647 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 EDARADDQ8WWZ3 215 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 IGFBPL1Q8WX77 278 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 CORO2AQ92828 525 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 RAB39BQ96DA2 213 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 ZNF714Q96N38 554 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 PHB2Q99623 299 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 RSRP1Q9BUV0 290 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 SLC2A9Q9NRM0 540 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 TAS2R3Q9NYW6 316 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 IDI2-AS1Q9NZ38 188 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 MGAT4CQ9UBM8 478 aa8.29□□□□□ -1.08
USP11-211ENST00000489111 CRYM-AS1A6NIL9 109 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 A8MV72 311 aaPredicted RBP8.28□□□□□ -1.08
USP11-211ENST00000489111 SFT2D2O95562 160 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 DUS4LO95620 317 aaKnown RBP8.28□□□□□ -1.08
USP11-211ENST00000489111 OMGP23515 440 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 NFYBP25208 207 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 COL8A1P27658 744 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 GNB2P62879 340 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 CD83Q01151 205 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 ZNF273Q14593 569 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 SLC9A3R2Q15599 337 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 C17orf58Q2M2W7 97 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 ESCO2Q56NI9 601 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 PRAMEF5Q5TYX0 476 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 ZNF787Q6DD87 383 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 CLEC2AQ6UVW9 174 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 TCF23Q7RTU1 214 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 ZNF295-AS1Q8N0V1 137 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 OR2AK2Q8NG84 335 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 FAM216AQ8WUB2 273 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 RTN4IP1Q8WWV3 396 aaPredicted RBP8.28□□□□□ -1.08
USP11-211ENST00000489111 TMEM230Q96A57 120 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 PPP1R14BQ96C90 147 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 NEURL2Q9BR09 285 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 PIMREGQ9BSJ6 248 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 PARP12Q9H0J9 701 aaKnown RBP8.28□□□□□ -1.08
USP11-211ENST00000489111 NAA60Q9H7X0 242 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 PATZ1Q9HBE1 687 aaKnown RBP8.28□□□□□ -1.08
USP11-211ENST00000489111 ZNF221Q9UK13 617 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 KCNIP3Q9Y2W7 256 aa8.28□□□□□ -1.08
USP11-211ENST00000489111 CACNA1DQ01668 2161 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 RNF212BA8MTL3 300 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 F5H0A9 414 aaPredicted RBP8.27□□□□□ -1.09
USP11-211ENST00000489111 GOSR2O14653 212 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 YPEL1O60688 119 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 FCN3O75636 299 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 SLC22A5O76082 557 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 HNRNPCP07910 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
USP11-211ENST00000489111 WNT2P09544 360 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 SULT1A3P0DMM9 295 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 SULT1A4P0DMN0 295 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 CGB3P0DN86 165 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 CGB7P0DN87 165 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 GNRHRP30968 328 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 RAB7AP51149 207 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 RND3P61587 244 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 DHODHQ02127 395 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 WDR25Q64LD2 544 aaPredicted RBP8.27□□□□□ -1.09
USP11-211ENST00000489111 TMEM200BQ69YZ2 307 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 LIN54Q6MZP7 749 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 ZNF841Q6ZN19 808 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 ZNF818PQ6ZRF7 136 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 OR10A7Q8NGE5 316 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 OR52M1Q8NGK5 317 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 MITD1Q8WV92 249 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 FAM168AQ92567 244 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 MARVELD3Q96A59 401 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 PERPQ96FX8 193 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 YPEL2Q96QA6 119 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 SSBP3Q9BWW4 388 aaPredicted RBP8.27□□□□□ -1.09
USP11-211ENST00000489111 TOLLIPQ9H0E2 274 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 OR2D2Q9H210 308 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 LINC00574Q9H8X3 128 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 CCL28Q9NRJ3 127 aa8.27□□□□□ -1.09
USP11-211ENST00000489111 GFOD1Q9NXC2 390 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms