RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 A0A1W2PRM7 423 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 RNASEK-C17orf49H0YIS7 233 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 F2RL2O00254 374 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 SULT1C2O00338 296 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 FABP7O15540 132 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 HSPA12AO43301 675 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 MMP23AO75900 390 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 RGS11O94810 467 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 IGHV1-69P01742 117 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 LPLP06858 475 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 SCTP09683 121 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 PTHLHP12272 177 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 SRD5A1P18405 259 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 ZBTB25P24278 435 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 DLX1P56177 255 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 HTD2P86397 168 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 PRB3Q04118 309 aaPredicted RBP8.41□□□□□ -1.06
SKA1-204ENST00000488454 SPANXN2Q5MJ10 180 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 STEAP3Q658P3 488 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 PYHIN1Q6K0P9 492 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 FAM131AQ6UXB0 335 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 IL17RELQ6ZVW7 336 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 OR4A4PQ8NGN8 299 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 UBALD1Q8TB05 177 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 ZNF596Q8TC21 504 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 FCAMRQ8WWV6 532 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 MAFIPQ8WZ33 124 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 TNFRSF14Q92956 283 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 KIRREL1Q96J84 757 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 CLEC7AQ9BXN2 247 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 SCPEP1Q9HB40 452 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 FAM96BQ9Y3D0 163 aa8.41□□□□□ -1.06
SKA1-204ENST00000488454 YLPM1P49750 1951 aaKnown RBP8.41□□□□□ -1.06
SKA1-204ENST00000488454 HIVEP1P15822 2718 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 CELSR1Q9NYQ6 3014 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 IGHV2-26A0A0B4J1V2 119 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 MEIS3P1A6NDR6 274 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 SSX5O60225 188 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 RBBP9O75884 186 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 ARG1P05089 322 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 CTXN2P0C2S0 81 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 GSTT2P0CG29 244 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 GSTT2BP0CG30 244 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 IGHV4-38-2P0DP08 117 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 ARPC4P59998 168 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 MRPS10P82664 201 aaKnown RBP8.4□□□□□ -1.06
SKA1-204ENST00000488454 KLRD1Q13241 179 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 Q6ZS49 121 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 HOGA1Q86XE5 327 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 BEST4Q8NFU0 473 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 OR11H6Q8NGC7 330 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 OR52L2PQ8NGH6 319 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 OR10V1Q8NGI7 309 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 OR6Q1Q8NGQ2 317 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 OR9G1Q8NH87 305 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 OR10J5Q8NHC4 309 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 CREB3L1Q96BA8 519 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 GFOD1Q9NXC2 390 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 SLC23A1Q9UHI7 598 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 JPT1Q9UK76 154 aa8.4□□□□□ -1.06
SKA1-204ENST00000488454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.39□□□□□ -1.07
SKA1-204ENST00000488454 A0A087X0M5 115 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 IGHV3-43A0A0B4J1X8 118 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 A0A1B0GX30 115 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 MEIOCA2RUB1 952 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 FAM172BPA6NC97 362 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 GABARAPH6UMI1 98 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 NPFFO15130 113 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 BET1O15155 118 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 YPEL1O60688 119 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 CRLF1O75462 422 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 IGHV3-7P01780 117 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 FCER2P06734 321 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 IGHV3-43DP0DP04 118 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 CD34P28906 385 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 GDNFP39905 211 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 CEACAM6P40199 344 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 OR3A3P47888 321 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 GNG10P50151 68 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 Q3ZCU0 254 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 MIDNQ504T8 468 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 PYDC2Q56P42 97 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 RNASE12Q5GAN4 147 aaKnown RBP8.39□□□□□ -1.07
SKA1-204ENST00000488454 KLF17Q5JT82 389 aaPredicted RBP8.39□□□□□ -1.07
SKA1-204ENST00000488454 XP32Q5T750 250 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 GVQW1Q8N7I0 195 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 OR10X1Q8NGY0 326 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 GPX8Q8TED1 209 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 GCDHQ92947 438 aaPredicted RBP8.39□□□□□ -1.07
SKA1-204ENST00000488454 LEAP2Q969E1 77 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 YPEL2Q96QA6 119 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 ABHD1Q96SE0 405 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 GINS4Q9BRT9 223 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 PTTG2Q9NZH5 202 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 ANXA10Q9UJ72 324 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 AMMECR1Q9Y4X0 333 aaPredicted RBP8.39□□□□□ -1.07
SKA1-204ENST00000488454 F8P00451 2351 aa8.39□□□□□ -1.07
SKA1-204ENST00000488454 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 J3QR06 171 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 CTDSPLO15194 276 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms