RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 A0A1W2PQL4 384 aaPredicted RBP6.99□□□□□ -1.29
COL17A1-207ENST00000488320 PRKYO43930 277 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 SULT1C4O75897 302 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 HTR3BO95264 441 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 MT-ND2P03891 347 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 OR2T7P0C7T2 308 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 EGR2P11161 476 aaPredicted RBP6.99□□□□□ -1.29
COL17A1-207ENST00000488320 ATP6V1B2P21281 511 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 ATP6V1E1P36543 226 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 MNAT1P51948 309 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 EWSR1Q01844 656 aaKnown RBP eCLIP6.99□□□□□ -1.29
COL17A1-207ENST00000488320 RSU1Q15404 277 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 KISS1Q15726 138 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 RPEL1Q2QD12 228 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 PIGYQ3MUY2 71 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 MOGAT2Q3SYC2 334 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 CD300EQ496F6 205 aaPredicted RBP6.99□□□□□ -1.29
COL17A1-207ENST00000488320 ATAD3CQ5T2N8 411 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 ZNF691Q5VV52 312 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 ELP2Q6IA86 826 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 LYG2Q86SG7 212 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 LAX1Q8IWV1 398 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 OR10H4Q8NGA5 316 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 OR10K1Q8NGX5 313 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 OR10AC1Q8NH08 325 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 DYNLRB2Q8TF09 96 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 PHLDA1Q8WV24 401 aaPredicted RBP6.99□□□□□ -1.29
COL17A1-207ENST00000488320 PRRG3Q9BZD7 231 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
COL17A1-207ENST00000488320 ADAM30Q9UKF2 790 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 TRAPPC2LQ9UL33 140 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 ING4Q9UNL4 249 aa6.99□□□□□ -1.29
COL17A1-207ENST00000488320 LOC102724200A0A096LPH7 203 aaPredicted RBP6.98□□□□□ -1.29
COL17A1-207ENST00000488320 TCRBV5S2A0A599 114 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 ZNF785A8K8V0 405 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 FCN1O00602 326 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 LCE2BO14633 110 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 RRHO14718 337 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 OR7C1O76099 320 aaPredicted RBP6.98□□□□□ -1.29
COL17A1-207ENST00000488320 NDUFA3O95167 84 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 GSTP1P09211 210 aaKnown RBP6.98□□□□□ -1.29
COL17A1-207ENST00000488320 ANXA8P13928 327 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 PRKACGP22612 351 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 CRISP1P54107 249 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 TNFRSF9Q07011 255 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 DYRK1AQ13627 763 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 TP53I3Q53FA7 332 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 NXNL2Q5VZ03 156 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 DEFB107AQ8IZN7 70 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 STX19Q8N4C7 294 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 ZNF439Q8NDP4 499 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 OR5T1Q8NG75 326 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 TNFAIP8L1Q8WVP5 186 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 MRPS24Q96EL2 167 aaKnown RBP6.98□□□□□ -1.29
COL17A1-207ENST00000488320 GGTLC1Q9BX51 225 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 MRPL20Q9BYC9 149 aaKnown RBP6.98□□□□□ -1.29
COL17A1-207ENST00000488320 FAM192AQ9GZU8 254 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 ST3GAL6Q9Y274 331 aa6.98□□□□□ -1.29
COL17A1-207ENST00000488320 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 AIPO00170 330 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 AIREO43918 545 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 FAM107AO95990 144 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 HBZP02008 142 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 MT-ND4P03905 459 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 RAP2AP10114 183 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 MECP2P51608 486 aaKnown RBP6.97□□□□□ -1.29
COL17A1-207ENST00000488320 SPATS1Q496A3 300 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 SYT6Q5T7P8 510 aaPredicted RBP6.97□□□□□ -1.29
COL17A1-207ENST00000488320 AADACL4Q5VUY2 407 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 LPCAT4Q643R3 524 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 STEAP3Q658P3 488 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 LINC00336Q6ZUF6 198 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 SLC16A13Q7RTY0 426 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 DHFR2Q86XF0 187 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 GID4Q8IVV7 300 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 HS3ST5Q8IZT8 346 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 TMEM217Q8N7C4 229 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 POC5Q8NA72 575 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 PXT1Q8NFP0 134 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 OR5D14Q8NGL3 314 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 OR2G2Q8NGZ5 317 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 OR1L1Q8NH94 360 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 CPNE2Q96FN4 548 aaPredicted RBP6.97□□□□□ -1.29
COL17A1-207ENST00000488320 GAB2Q9UQC2 676 aa6.97□□□□□ -1.29
COL17A1-207ENST00000488320 A0A0B4J203 849 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 M0R129 80 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 SPRY2O43597 315 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 SULT1B1O43704 296 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 OR2A4O95047 310 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 ISG15P05161 165 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 HTR1AP08908 422 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 AADACP22760 399 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 BMI1P35226 326 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 PRR20EP86478 221 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 PRR20CP86479 221 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 PRR20DP86480 221 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 PRR20BP86481 221 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 PRR20AP86496 221 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 PTGES3Q15185 160 aaKnown RBP6.96□□□□□ -1.3
COL17A1-207ENST00000488320 TMEM30BQ3MIR4 351 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms