RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 C12orf29Q8N999 325 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 GPR26Q8NDV2 337 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 OR4M1Q8NGD0 313 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 OR52L1Q8NGH7 329 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 OR1P1Q8NH06 330 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 OR10J5Q8NHC4 309 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 ZNRF2Q8NHG8 242 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 C15orf40Q8WUR7 153 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 LRRC29Q8WV35 223 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 CYGBQ8WWM9 190 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 EXOSC8Q96B26 276 aaKnown RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 BORCS7Q96B45 105 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 RPUSD4Q96CM3 377 aaKnown RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 DGCR14Q96DF8 476 aaKnown RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 BTF3L4Q96K17 158 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 FAM210BQ96KR6 192 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 TIMM17AQ99595 171 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 HSD17B10Q99714 261 aaKnown RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 PECRQ9BY49 303 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 TRIM4Q9C037 500 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 SETD5Q9C0A6 1442 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 SPNS1Q9H2V7 528 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 ZSCAN16Q9H4T2 348 aaPredicted RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 CLMPQ9H6B4 373 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 NMNAT1Q9HAN9 279 aaPredicted RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 EDA2RQ9HAV5 297 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 BIN3Q9NQY0 253 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 PDS5BQ9NTI5 1447 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 GID8Q9NWU2 228 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 CMTM6Q9NX76 183 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 MRPL27Q9P0M9 148 aaKnown RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 TMEM216Q9P0N5 145 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 RBM12B-AS1Q9P1G2 102 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 TRMT112Q9UI30 125 aaKnown RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 NDUFAF1Q9Y375 327 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 INSIG2Q9Y5U4 225 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 NUBP2Q9Y5Y2 271 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 HEBP2Q9Y5Z4 205 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 MTUS2Q5JR59 1369 aa1.19□□□□□ -2.22
USP9X-208ENST00000487625 RAI1Q7Z5J4 1906 aaPredicted RBP1.19□□□□□ -2.22
USP9X-208ENST00000487625 ERCC6Q03468 1493 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 NAV1Q8NEY1 1877 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 WRNQ14191 1432 aaPredicted RBP eCLIP1.18□□□□□ -2.22
USP9X-208ENST00000487625 TAF1LQ8IZX4 1826 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 IGLV11-55A0A075B6I3 123 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 IGHV7-4-1A0A0J9YVY3 117 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 IGHV5-10-1A0A0J9YXX1 117 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 A0A1B0GVX0 72 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 NKX2-6A6NCS4 301 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 PRORSD1PA6NEY8 169 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 H3BSA7 217 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 M0R1X1 148 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 BHLHE40O14503 412 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 CD5LO43866 347 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 COX7A2P2O60397 106 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 SS18L1O75177 396 aaPredicted RBP1.18□□□□□ -2.22
USP9X-208ENST00000487625 SERPINB7O75635 380 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 SUPT7LO94864 414 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 CNIH1O95406 144 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 DHFRP00374 187 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 IFNA1P01562 189 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 IGLV3-27P01718 113 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 IGHV3-11P01762 117 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 FABP3P05413 133 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 GIPP09681 153 aaPredicted RBP1.18□□□□□ -2.22
USP9X-208ENST00000487625 IGHV1-8P0DP01 117 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 CXCL2P19875 107 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 CXCL3P19876 107 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 GADD45AP24522 165 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 IMPA1P29218 277 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 SERPINB1P30740 379 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 OR10J1P30954 320 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 NMUP48645 174 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 ZNF136P52737 540 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 CCL23P55773 120 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 TAS2R46P59540 309 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 PSME3P61289 254 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 HSPE1P61604 102 aaKnown RBP1.18□□□□□ -2.22
USP9X-208ENST00000487625 RBX1P62877 108 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 GNG3P63215 75 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 HLA-DRB3P79483 266 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 RUNX1Q01196 453 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 PMAIP1Q13794 54 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 C1DQ13901 141 aaKnown RBP1.18□□□□□ -2.22
USP9X-208ENST00000487625 MMDQ15546 238 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 SSX1Q16384 188 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 ACSBG2Q5FVE4 666 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 FAM201AQ5SY85 155 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 C9orf64Q5T6V5 341 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 TMEM78Q5T7P6 136 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 HENMT1Q5T8I9 393 aaKnown RBP1.18□□□□□ -2.22
USP9X-208ENST00000487625 HES5Q5TA89 166 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 FAM78BQ5VT40 261 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 LPCAT3Q6P1A2 487 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 C3orf33Q6P1S2 294 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 DNAJC24Q6P3W2 148 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 ZNF773Q6PK81 442 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 XKRXQ6PP77 449 aa1.18□□□□□ -2.22
USP9X-208ENST00000487625 CEMP1Q6PRD7 247 aaPredicted RBP1.18□□□□□ -2.22
USP9X-208ENST00000487625 RASSF6Q6ZTQ3 369 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms