RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 WDYHV1Q96HA8 205 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 MIOXQ9UGB7 285 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 PLCE1Q9P212 2302 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 F8VVB4 439 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 F8VWA3 439 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 SYNGR2O43760 224 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 SRSF10O75494 262 aaKnown RBP11.32□□□□□ -0.6
HMGN1-216ENST00000486741 CRYGSP22914 178 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 UBE2G2P60604 165 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 RAB4BP61018 213 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 COL10A1Q03692 680 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 SPRR3Q9UBC9 169 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 FHITP49789 147 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 GFRA1P56159 465 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 TMEM108Q6UXF1 575 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 NECAP1Q8NC96 275 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 CYYR1Q96J86 154 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 C1QTNF5Q9BXJ0 243 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 PROB1E7EW31 1015 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 H0YL77 283 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-216ENST00000486741 CCL1P22362 96 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 F2RP25116 425 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 STPG2Q8N412 459 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 TMEM45BQ96B21 275 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 TM2D1Q9BX74 207 aa11.32□□□□□ -0.6
HMGN1-216ENST00000486741 TRIOO75962 3097 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 HNF1AP20823 631 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 FGF7P21781 194 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 TAS2R30P59541 319 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 RNF212Q495C1 297 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 RBMS3Q6XE24 437 aaKnown RBP11.31□□□□□ -0.6
HMGN1-216ENST00000486741 LINC00518Q8N0U6 118 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 TMEM230Q96A57 120 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 ISOC2Q96AB3 205 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 MARS2Q96GW9 593 aaKnown RBP11.31□□□□□ -0.6
HMGN1-216ENST00000486741 LINC00470Q9BZP3 86 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 MBP02144 154 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 MDH2P40926 338 aaKnown RBP11.31□□□□□ -0.6
HMGN1-216ENST00000486741 LFNGQ8NES3 379 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 OR4A4PQ8NGN8 299 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 POM121L2Q96KW2 1035 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 Q9N2K0 584 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 RNF222A6NCQ9 220 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 C17orf112F2Z3M2 114 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 PPP1R2P9O14990 202 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 IGHV1-2P23083 117 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 CTSSP25774 331 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 KCNJ3P48549 501 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 SLC38A11Q08AI6 406 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 GUCA2BQ16661 112 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 OR5P3Q8WZ94 311 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 OR2V2Q96R30 315 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 SERTAD4Q9NUC0 356 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
HMGN1-216ENST00000486741 HKR1P10072 659 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 HIST3H3Q16695 136 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 FAM201AQ5SY85 155 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 MYPOPQ86VE0 399 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-216ENST00000486741 C9orf106Q8NAJ2 232 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 RNF166Q96A37 237 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-216ENST00000486741 TMEM222Q9H0R3 208 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-216ENST00000486741 ZNF727A8MUV8 499 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 DEDDO75618 318 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 OR2C1O95371 312 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 FABP9Q0Z7S8 132 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 PSG7Q13046 419 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 IL34Q6ZMJ4 242 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 LINC00469Q8N7U9 141 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 OR4F5Q8NH21 305 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 RAB39BQ96DA2 213 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 OR4F4Q96R69 305 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 MMP24Q9Y5R2 645 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 ABCD4O14678 606 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 LILRA1O75019 489 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 CDS2O95674 445 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 CD8AP01732 235 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 HBZP02008 142 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 ATP6V0CP27449 155 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 PRDX2P32119 198 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 P2RY1P47900 373 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 GLIPR1P48060 266 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 PSMB3P49720 205 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 BCL2L2Q92843 193 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-216ENST00000486741 RAB40CQ96S21 281 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 MED9Q9NWA0 146 aa11.3□□□□□ -0.6
HMGN1-216ENST00000486741 H0YIZ8 118 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 PHOX2AO14813 284 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-216ENST00000486741 MT-CO2P00403 227 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 ANOS1P23352 680 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 MPV17P39210 176 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 GNB1P62873 340 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 HES1Q14469 280 aa11.29□□□□□ -0.6
HMGN1-216ENST00000486741 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms