RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, human

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39A-208	ENST00000486159	ZNF747	Q9BV97	191 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	ZNF286A	Q9HBT8	521 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	UFSP2	Q9NUQ7	469 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	NECAP2	Q9NVZ3	263 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SHPK	Q9UHJ6	478 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	AK3	Q9UIJ7	227 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	ANXA10	Q9UJ72	324 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MGAT4A	Q9UM21	535 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	TRRAP	Q9Y4A5	3859 aa		7.76	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MEGF8	Q7Z7M0	2845 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	TRBV6-6	A0A0A6YYG2	114 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	TRAV40	A0A0B4J280	105 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	C22orf46	C9J442	243 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MCRIP1	C9JLW8	97 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	FABP7	O15540	132 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	OR7C1	O76099	320 aa	Predicted RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	FCGR3A	P08637	254 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	CTXN2	P0C2S0	81 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	RPS2	P15880	293 aa	Known RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	HLA-G	P17693	338 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	BCL3	P20749	454 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MDK	P21741	143 aa	Predicted RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	TNFSF4	P23510	183 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MDH2	P40926	338 aa	Known RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DHODH	Q02127	395 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SCGB2A2	Q13296	93 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	OR8G1	Q15617	311 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	PIGY	Q3MUY2	71 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	ESCO2	Q56NI9	601 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	TMEM128	Q5BJH2	165 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SPIN3	Q5JUX0	258 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	LIN54	Q6MZP7	749 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	HAGHL	Q6PII5	290 aa	Predicted RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DHRS11	Q6UWP2	260 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	ZNF841	Q6ZN19	808 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	LYG2	Q86SG7	212 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	FAM58A	Q8N1B3	248 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	FGFRL1	Q8N441	504 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	OR2AK2	Q8NG84	335 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	OR13G1	Q8NGZ3	307 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SGMS2	Q8NHU3	365 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SLAMF9	Q96A28	289 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	PHB2	Q99623	299 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SULT4A1	Q9BR01	284 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	ADAT1	Q9BUB4	502 aa	Known RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	GON7	Q9BXV9	100 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	FGF23	Q9GZV9	251 aa	Predicted RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MS4A7	Q9GZW8	240 aa	Predicted RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	TLNRD1	Q9H1K6	362 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	UNKL	Q9H9P5	680 aa	Known RBP	7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	BEX1	Q9HBH7	125 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	EHF	Q9NZC4	300 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MTCH1	Q9NZJ7	389 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MGAT4C	Q9UBM8	478 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	GLS2	Q9UI32	602 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	GPR132	Q9UNW8	380 aa		7.75	□□□□□ -1.17
TMEM39A-208	ENST00000486159	IGHV2-70D	A0A0C4DH43	119 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	KIR2DS1	A0A191URI9	304 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	OR2AT4	A6NND4	320 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	RGS13	O14921	159 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DUS4L	O95620	317 aa	Known RBP	7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	CSN2	P05814	226 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	CXCL3	P19876	107 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	ZBTB25	P24278	435 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	KIR2DS4	P43632	304 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	NPBWR2	P48146	333 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	ERVK11-1	P61568	191 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	FGL1	Q08830	312 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DHRS2	Q13268	280 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	KIR2DS1	Q14954	304 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DEFB112	Q30KQ8	113 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MOB1B	Q7L9L4	216 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	TMED4	Q7Z7H5	227 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MUC20	Q8N307	709 aa	Predicted RBP	7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	TEX29	Q8N6K0	151 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	BOLL	Q8N9W6	283 aa	Known RBP	7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	MITD1	Q8WV92	249 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SLA2	Q9H6Q3	261 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SEBOX	Q9HB31	216 aa	Predicted RBP	7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	CTSZ	Q9UBR2	303 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	C14orf166	Q9Y224	244 aa	Known RBP	7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	VSIG4	Q9Y279	399 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DOCK11	Q5JSL3	2073 aa		7.74	□□□□□ -1.17
TMEM39A-208	ENST00000486159		A0A1B0GW55	424 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	C9orf170	A2RU37	121 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	HOXA3	O43365	443 aa	Predicted RBP	7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SYNGR1	O43759	233 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	SLC22A5	O76082	557 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DIRAS3	O95661	229 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	NAPSA	O96009	420 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	HLA-A	P01891	365 aa	Known RBP	7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	CTSD	P07339	412 aa	Predicted RBP	7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	RNASE1	P07998	156 aa	Known RBP	7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DUX4L2	P0CJ85	424 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DUX4L3	P0CJ86	424 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DUX4L4	P0CJ87	422 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DUX4L5	P0CJ88	424 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DUX4L6	P0CJ89	424 aa		7.73	□□□□□ -1.17
TMEM39A-208	ENST00000486159	DUX4L7	P0CJ90	424 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms