RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	C5orf24	Q7Z6I8	188 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	OR52L2P	Q8NGH6	319 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	OR10V1	Q8NGI7	309 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	CREB3L1	Q96BA8	519 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	MALSU1	Q96EH3	234 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	ST6GALNAC5	Q9BVH7	336 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	AUNIP	Q9H7T9	357 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	ADAM30	Q9UKF2	790 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	ELF5	Q9UKW6	265 aa	Predicted RBP	11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	PSG11	Q9UQ72	335 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	MRPS7	Q9Y2R9	242 aa	Known RBP	11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	ODF3B	A8MYP8	253 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967		J3QR06	171 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	HSPA12A	O43301	675 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	RGS11	O94810	467 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	ELK1	P19419	428 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	DTYMK	P23919	212 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	CEACAM3	P40198	252 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	KIR2DS4	P43632	304 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	LOXL3	P58215	753 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	HLA-DRB3	P79483	266 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	HTD2	P86397	168 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	KIR2DS1	Q14954	304 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	MINOS1	Q5TGZ0	78 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	LHFPL4	Q7Z7J7	247 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	BEND2	Q8NDZ0	799 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	OR10X1	Q8NGY0	326 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	NUDCD2	Q8WVJ2	157 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	DGCR14	Q96DF8	476 aa	Known RBP	11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF48	Q96MX3	618 aa	Predicted RBP	11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	RBM38	Q9H0Z9	239 aa	Known RBP	11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	DPM3	Q9P2X0	92 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.23	□□□□□ -0.61
SCAP-211	ENST00000485967	MINOS1-NBL1	R4GNA1	71 aa		11.23	□□□□□ -0.61
SCAP-211	ENST00000485967		A0A1W2PPE3	182 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	DPPA5	A6NC42	116 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	BTBD17	A6NE02	478 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	LEUTX	A8MZ59	168 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	SCT	P09683	121 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	TAS2R20	P59543	309 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	HILS1	P60008	231 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	SSX2	Q16385	188 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	HLA-DRB5	Q30154	266 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967		Q3ZCU0	254 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	MORN2	Q502X0	79 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	UTF1	Q5T230	341 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	STEAP3	Q658P3	488 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967		Q6YL49	198 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967		Q6ZPA2	131 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	MCFD2	Q8NI22	146 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	C17orf50	Q8WW18	174 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	MAFIP	Q8WZ33	124 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	DCUN1D5	Q9BTE7	237 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	MMP28	Q9H239	520 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	DPAGT1	Q9H3H5	408 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	TNFRSF19	Q9NS68	423 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	JPT1	Q9UK76	154 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	HILPDA	Q9Y5L2	63 aa		11.22	□□□□□ -0.61
SCAP-211	ENST00000485967	BUB1B-PAK6	H3BSN5	160 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	CTDSP2	O14595	271 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	FABP7	O15540	132 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	HOXA3	O43365	443 aa	Predicted RBP	11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	YPEL1	O60688	119 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	IGLV1-47	P01700	117 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	MELTF	P08582	738 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	GSTT2	P0CG29	244 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	GSTT2B	P0CG30	244 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	ZBTB25	P24278	435 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	IL3RA	P26951	378 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	PRSS3	P35030	304 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	PPP1CC	P36873	323 aa	Known RBP	11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	CBX5	P45973	191 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	PLA1A	Q53H76	456 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	OR4P4	Q8NGL7	312 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	OR4A4P	Q8NGN8	299 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	YPEL2	Q96QA6	119 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	MEGF9	Q9H1U4	602 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	PRDM13	Q9H4Q3	707 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	ABCB10	Q9NRK6	738 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	EXTL2	Q9UBQ6	330 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	SLC23A1	Q9UHI7	598 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	MGAM2	Q2M2H8	2515 aa		11.21	□□□□□ -0.61
SCAP-211	ENST00000485967	TRIM77	I1YAP6	450 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	BET1	O15155	118 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	SSX5	O60225	188 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	VENTX	O95231	258 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	PTHLH	P12272	177 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	PAX6	P26367	422 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	CEACAM6	P40199	344 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	ARHGDIB	P52566	201 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	MADCAM1	Q13477	382 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	GNMT	Q14749	295 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	SNX29P2	Q8IUI4	249 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	C8orf31	Q8N9H6	132 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	SSMEM1	Q8WWF3	244 aa		11.2	□□□□□ -0.62
SCAP-211	ENST00000485967	RPE	Q96AT9	228 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms