RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 FAM90A16PA6NEW6 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A20PA6NIJ5 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A8PA6NJQ4 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A7PA6NKC0 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A22PA8MWA6 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A12PA8MX19 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A5PA8MXJ8 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A23PA8MXZ1 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A15PP0C7V4 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A13PP0C7W8 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A14PP0C7W9 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FAM90A24PP0C7X0 464 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 SPINK2P20155 84 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 BTF3P20290 206 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 GNB2P62879 340 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 CEACAM16Q2WEN9 425 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 SLC23A3Q6PIS1 610 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 CPEB3Q8NE35 698 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 OR1K1Q8NGR3 316 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 FOXB1Q99853 325 aa16.82■□□□□ 0.28
RPUSD3-216ENST00000484134 GALR2O43603 387 aaPredicted RBP16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 KBTBD11O94819 623 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 GPM6AP51674 278 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 FGF12P61328 243 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 RAC1P63000 192 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 SERF2P84101 59 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 MEF2BQ02080 365 aaPredicted RBP16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 PCOLCEQ15113 449 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 TGIF2LYQ8IUE0 185 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 GATAD1Q8WUU5 269 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 TMEM170AQ8WVE7 144 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 LHX4Q969G2 390 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 ERRFI1Q9UJM3 462 aaPredicted RBP16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 RNF150Q9ULK6 438 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 KIR2DS1A0A191URI9 304 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 PPP5D1E7EU14 171 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 IGKV1-5P01602 117 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 SLC25A6P12236 298 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 KIR2DS4P43632 304 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 KIR2DS1Q14954 304 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 ACSF3Q4G176 576 aaPredicted RBP16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 OR56B2PQ8NGI1 322 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 SPSB4Q96A44 273 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 WDR61Q9GZS3 305 aaKnown RBP16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 FUT9Q9Y231 359 aa16.81■□□□□ 0.28
RPUSD3-216ENST00000484134 A0A1W2PPQ1 181 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 ZNF716A6NP11 495 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 H7BYZ3 331 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 GDF9O60383 454 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 MRPL30Q8TCC3 161 aaKnown RBP16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 WFIKKN1Q96NZ8 548 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 SNHG12Q9BXW3 62 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 LBX1P52954 281 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 PMS2P11Q13670 270 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 AAED1Q7RTV5 226 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 ADGRG7Q96K78 797 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 SF3B5Q9BWJ5 86 aaKnown RBP16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 C19orf25Q9UFG5 118 aaPredicted RBP16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 RARRES3Q9UL19 164 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 OR2W1Q9Y3N9 320 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 FRYLO94915 3013 aa16.8■□□□□ 0.28
RPUSD3-216ENST00000484134 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 IGLV2-14P01704 120 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 CTXN2P0C2S0 81 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 TECTBQ96PL2 329 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 C1QTNF5Q9BXJ0 243 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 SLC39A9Q9NUM3 307 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 IFNA1P01562 189 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 MMP7P09237 267 aaPredicted RBP16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 RAC3P60763 192 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 PRDX4Q13162 271 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 TESK1Q15569 626 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 TEX38Q6PEX7 206 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 ACY3Q96HD9 319 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 PARLQ9H300 379 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 PLA2G3Q9NZ20 509 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 FREM1Q5H8C1 2179 aa16.79■□□□□ 0.28
RPUSD3-216ENST00000484134 B4E171 279 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 TSPAN7P41732 249 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 PAX5Q02548 391 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 TNFRSF9Q07011 255 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 ACTL10Q5JWF8 245 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 SPANXN5Q5MJ07 72 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 YRDCQ86U90 279 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 SMRP1Q8NCR6 262 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 CADM4Q8NFZ8 388 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 TAF15Q92804 592 aaKnown RBP eCLIP16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 ZNF488Q96MN9 340 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 UBE2L5PA0A1B0GUS4 154 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 SYNGR1O43759 233 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 HRASP01112 189 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 IDH3GP51553 393 aaPredicted RBP16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 B3GALT5-AS1P59052 145 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 MRPL14Q6P1L8 145 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 CLDN23Q96B33 292 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 OR5B12Q96R08 314 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 OR1A1Q9P1Q5 309 aa16.78■□□□□ 0.28
RPUSD3-216ENST00000484134 A0A1W2PQM1 296 aa16.77■□□□□ 0.28
RPUSD3-216ENST00000484134 A0A1W2PR80 420 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms