RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 HSPA12AO43301 675 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 HOXB5P09067 269 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 IL2RGP31785 369 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 CMTM1Q8IZ96 169 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 MUC15Q8N387 334 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 PRR18Q8N4B5 295 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 UBALD1Q8TB05 177 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 ARL11Q969Q4 196 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 TMEM56Q96MV1 263 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 DCTN5Q9BTE1 182 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 TMEM222Q9H0R3 208 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 PAIP2BQ9ULR5 123 aaKnown RBP11.69□□□□□ -0.54
CLK3-204ENST00000483723 TMEM56-RWDD3S4R434 201 aa11.69□□□□□ -0.54
CLK3-204ENST00000483723 DIDO1Q9BTC0 2240 aaKnown RBP11.68□□□□□ -0.54
CLK3-204ENST00000483723 PPIAL4EA0A075B759 164 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 PPIAL4DF5H284 164 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 MPC2O95563 127 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 PPIAL4FP0DN26 164 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 UCP1P25874 307 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 PSMB6P28072 239 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 SRPXP78539 464 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 MSMO1Q15800 293 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 GGNBP1Q5YKI7 109 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 DEFB108BQ8NET1 73 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 OR52L2PQ8NGH6 319 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 LHFPL5Q8TAF8 219 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 CCL13Q99616 98 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 RNF126Q9BV68 326 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 PARP12Q9H0J9 701 aaKnown RBP11.68□□□□□ -0.54
CLK3-204ENST00000483723 OR6C3Q9NZP0 311 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 PPIAL4AQ9Y536 164 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 DSCAML1Q8TD84 2053 aa11.68□□□□□ -0.54
CLK3-204ENST00000483723 IGSF10Q6WRI0 2623 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 F2RL2O00254 374 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 PHF1O43189 567 aaPredicted RBP11.67□□□□□ -0.54
CLK3-204ENST00000483723 SPINT2O43291 252 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 B3GALNT1O75752 331 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 CDS2O95674 445 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 IFNA21P01568 189 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 GYPAP02724 150 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 LYL1P12980 280 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 SELLP14151 372 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 RPA2P15927 270 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 PPOXP50336 477 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 ZBTB34Q8NCN2 500 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 CORO2AQ92828 525 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 C14orf79Q96F83 325 aa11.67□□□□□ -0.54
CLK3-204ENST00000483723 BBC3Q96PG8 261 aaPredicted RBP11.67□□□□□ -0.54
CLK3-204ENST00000483723 FXYD6-FXYD2A0A087WZ82 144 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 A0A1B0GW55 424 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 H0Y980 276 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 L7N2F9 121 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 FSTL3O95633 263 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUX4L2P0CJ85 424 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUX4L3P0CJ86 424 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUX4L4P0CJ87 422 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUX4L5P0CJ88 424 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUX4L6P0CJ89 424 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUX4L7P0CJ90 424 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 C4BPBP20851 252 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 F2RP25116 425 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 S100GP29377 79 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 SSTR5P35346 364 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 OPCMLQ14982 345 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUX4L9Q6RFH8 374 aaPredicted RBP11.66□□□□□ -0.54
CLK3-204ENST00000483723 LYZL2Q7Z4W2 148 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 ZNF546Q86UE3 836 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 FAM216AQ8WUB2 273 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 IL22RA2Q969J5 263 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 LINC00574Q9H8X3 128 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUX4Q9UBX2 424 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 FBXO9Q9UK97 447 aaPredicted RBP11.66□□□□□ -0.54
CLK3-204ENST00000483723 TNFSF18Q9UNG2 199 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 H0YIZ8 118 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 ARPC5O15511 151 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 OR8U9P0C7N5 309 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 SSTR2P30874 369 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 EIF4EBP1Q13541 118 aaPredicted RBP11.66□□□□□ -0.54
CLK3-204ENST00000483723 GNMTQ14749 295 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 C17orf58Q2M2W7 97 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 FAM53AQ6NSI3 398 aaPredicted RBP11.66□□□□□ -0.54
CLK3-204ENST00000483723 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
CLK3-204ENST00000483723 OR8U1Q8NH10 309 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 CCL17Q92583 94 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 OR2S2Q9NQN1 319 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 UBE2J1Q9Y385 318 aaPredicted RBP11.66□□□□□ -0.54
CLK3-204ENST00000483723 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
CLK3-204ENST00000483723 HIVEP3Q5T1R4 2406 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 IGHV1-69-2A0A0G2JMI3 117 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 YPEL1O60688 119 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 IGFBP2P18065 325 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 S100A11P31949 105 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 LOXL3P58215 753 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 IAH1Q2TAA2 248 aaPredicted RBP11.65□□□□□ -0.54
CLK3-204ENST00000483723 TMUB2Q71RG4 321 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 DRAM1Q8N682 238 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 FAM216BQ8N7L0 139 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 RFESDQ8TAC1 157 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms