RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 ZNF519Q8TB69 540 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 RAB37Q96AX2 223 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 ADTRPQ96IZ2 230 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 SOSTQ9BQB4 213 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 ASCL3Q9NQ33 180 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 COLQQ9Y215 455 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 TRAV39A0A0B4J263 110 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 LOC105371267A0A1B0GV96 52 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 LIPT2A6NK58 231 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 M0R296 226 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 CD82P27701 267 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 GGTLC2Q14390 218 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 WFIKKN1Q96NZ8 548 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 PARP14Q460N5 1801 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 PSG6Q00889 435 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 NHLRC3Q5JS37 347 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 REC114Q7Z4M0 266 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 ZAR1Q86SH2 424 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 PRNTQ86SH4 94 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 VSTM2LQ96N03 204 aa8.35□□□□□ -1.07
CDK5RAP2-216ENST00000483412 TRIP11Q15643 1979 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 M0R3E3 92 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 KLF7O75840 302 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 NDUFB4O95168 129 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 HLA-DQB1P01920 261 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 BGLAPP02818 100 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 PRRX1P54821 245 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 GUSBP11Q6P575 273 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 WDR31Q8NA23 367 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 MRPL18Q9H0U6 180 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 MPTX1A8MV57 137 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 GAPDHP04406 335 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 CD1BP29016 333 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 HFEQ30201 348 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 OR8I2Q8N0Y5 310 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 HRKO00198 91 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 MT-CO3P00414 261 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 HOXC4P09017 264 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 MFAP2P55001 183 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 GPBAR1Q8TDU6 330 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 CCL17Q92583 94 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 AMMECR1Q9Y4X0 333 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 RECKO95980 971 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 FCARP24071 287 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 HIST1H2BAQ96A08 127 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 ZNF764Q96H86 408 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 IL36RNQ9UBH0 155 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 KCNK7Q9Y2U2 307 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 CASP8AP2Q9UKL3 1982 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 OTX1P32242 354 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 RELBQ01201 579 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 GRAMD2BQ96HH9 432 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 COX14Q96I36 57 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 HES7Q9BYE0 225 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 R4GN57 208 aa8.34□□□□□ -1.07
CDK5RAP2-216ENST00000483412 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 CELA2BP08218 269 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 APELAP0DMC3 54 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 LINC00469Q8N7U9 141 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 TREM2Q9NZC2 230 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 KIF13BQ9NQT8 1826 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 A0A1W2PPC1 479 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 A0A1W2PQD3 144 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 FCGR3AP08637 254 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 HOXD4P09016 255 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 TRGC1P0CF51 173 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 NXPH1P58417 271 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 TWIST1Q15672 202 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 RNF133Q8WVZ7 376 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 OR2V2Q96R30 315 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 RASL11BQ9BPW5 248 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 THYN1Q9P016 225 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 TRGV8A0A0C4DH27 118 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 H7C2G1 150 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 FHITP49789 147 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 KLF3P57682 345 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 SNRNP40Q96DI7 357 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 PKIBQ9C010 78 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 SH3BGRL3Q9H299 93 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 COA4Q9NYJ1 87 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 IL19Q9UHD0 177 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 A0A0B4J293 547 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 FAM157AC9JC47 383 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 CDIPTO14735 213 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 PTP4A3O75365 173 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 KIR2DL1P43626 348 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 Q5BKY6 102 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 DGAT2L7PQ6IED9 249 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 C12orf54Q6X4T0 127 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 VSTM2AQ8TAG5 236 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 PTX4Q96A99 478 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 PGLYRP3Q96LB9 341 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 ZNF665Q9H7R5 613 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 ZNF256Q9Y2P7 627 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 LTBP1Q14766 1721 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 LOC107984156A0A0G2JMH3 177 aa8.33□□□□□ -1.08
CDK5RAP2-216ENST00000483412 SERF2P84101 59 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms