RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 H1FXQ92522 213 aaKnown RBP6.78□□□□□ -1.32
USP4-210ENST00000483212 CREB3L1Q96BA8 519 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 MOB3AQ96BX8 217 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 GALMQ96C23 342 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 SLC25A21Q9BQT8 299 aaPredicted RBP6.78□□□□□ -1.32
USP4-210ENST00000483212 GINS4Q9BRT9 223 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 SSBP3Q9BWW4 388 aaPredicted RBP6.78□□□□□ -1.32
USP4-210ENST00000483212 TMPRSS13Q9BYE2 586 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 NUDT15Q9NV35 164 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 RPUSD1Q9UJJ7 312 aaKnown RBP6.78□□□□□ -1.32
USP4-210ENST00000483212 SCP2D1Q9UJQ7 156 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 ZNF221Q9UK13 617 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 JPT1Q9UK76 154 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 GPR132Q9UNW8 380 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 VSIG4Q9Y279 399 aa6.78□□□□□ -1.32
USP4-210ENST00000483212 CSMD1Q96PZ7 3565 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 ASH1LQ9NR48 2969 aaKnown RBP6.77□□□□□ -1.33
USP4-210ENST00000483212 IGKV1D-13A0A0B4J2D9 117 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 VGLL3A8MV65 326 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 FAM157AC9JC47 383 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 ARPC1BO15143 372 aaKnown RBP6.77□□□□□ -1.33
USP4-210ENST00000483212 SPINT2O43291 252 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 YPEL1O60688 119 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 ZNF728P0DKX0 622 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 IGKV1-13P0DP09 117 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 VSIG10L2P0DP72 767 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 OMGP23515 440 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 FPR2P25090 351 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 RAG2P55895 527 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 UCP3P55916 312 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 TSPAN5P62079 268 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 GNB2P62879 340 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 SURF2Q15527 256 aaPredicted RBP6.77□□□□□ -1.33
USP4-210ENST00000483212 TMEM30BQ3MIR4 351 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 ESCO2Q56NI9 601 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 LY6G6FQ5SQ64 297 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 PRAMEF5Q5TYX0 476 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 HEPN1Q6WQI6 88 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 TMEM17Q86X19 198 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 FAM185AQ8N0U4 392 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 ZDHHC22Q8N966 263 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 ZNF439Q8NDP4 499 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 OR10A7Q8NGE5 316 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 OR52M1Q8NGK5 317 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 OR10J5Q8NHC4 309 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 MARCH1Q8TCQ1 289 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 IL1F10Q8WWZ1 152 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 TMEM230Q96A57 120 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 ZNF714Q96N38 554 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 YPEL2Q96QA6 119 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 RTBDNQ9BSG5 229 aaPredicted RBP6.77□□□□□ -1.33
USP4-210ENST00000483212 GAL3ST2Q9H3Q3 398 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 C5orf66Q9H5L9 145 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 GFOD1Q9NXC2 390 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 RDH8Q9NYR8 311 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 IDI2-AS1Q9NZ38 188 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 SLC23A1Q9UHI7 598 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 POLR3KQ9Y2Y1 108 aaPredicted RBP6.77□□□□□ -1.33
USP4-210ENST00000483212 OR2W1Q9Y3N9 320 aa6.77□□□□□ -1.33
USP4-210ENST00000483212 ANKRD17O75179 2603 aaKnown RBP6.77□□□□□ -1.33
USP4-210ENST00000483212 TRAV6A0A075B6T7 132 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 A0A087X0M5 115 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 IGHV3-43A0A0B4J1X8 118 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 PPIAL4CA0A0B4J2A2 164 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 A0A1B0GX30 115 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 INMT-MINDY4F8WBC2 141 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 ITGB1BP1O14713 200 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 IGLV2-14P01704 120 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 RBP4P02753 201 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 CTSDP07339 412 aaPredicted RBP6.76□□□□□ -1.33
USP4-210ENST00000483212 H2AFB2P0C5Z0 115 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 PPIAL4GP0DN37 164 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 IGHV3-43DP0DP04 118 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 SLC25A16P16260 332 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 ANXA7P20073 488 aaKnown RBP6.76□□□□□ -1.33
USP4-210ENST00000483212 ZBTB25P24278 435 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 PPP1CCP36873 323 aaKnown RBP6.76□□□□□ -1.33
USP4-210ENST00000483212 CEACAM6P40199 344 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 ECI1P42126 302 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 ZNF134P52741 427 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 BAMBIQ13145 260 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 LTC4SQ16873 150 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 MORN2Q502X0 79 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 Q5PR19 223 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 PRSS57Q6UWY2 283 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 Q8N7P7 452 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 OR10V1Q8NGI7 309 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 RAB39BQ96DA2 213 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 C5orf30Q96GV9 206 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 DMRTB1Q96MA1 342 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 AGMATQ9BSE5 352 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 RSRP1Q9BUV0 290 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 OR2S2Q9NQN1 319 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 ZNF69Q9UC07 566 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 ABCA2Q9BZC7 2435 aa6.76□□□□□ -1.33
USP4-210ENST00000483212 AKAP9Q99996 3911 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 LOC105371242A0A075B767 164 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 IGHV2-70DA0A0C4DH43 119 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms