RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 COX7A1P24310 79 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 NFYBP25208 207 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 HRH1P35367 487 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 TRAT1Q6PIZ9 186 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 C1orf122Q6ZSJ8 110 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 TMEM229BQ8NBD8 167 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 NANPQ8TBE9 248 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 BEX2Q9BXY8 128 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 PALMDQ9NP74 551 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 MGAT4AQ9UM21 535 aa16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 NSD1Q96L73 2696 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC12-220ENST00000482645 POM121CA8CG34 1229 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 C12orf77C9JDV5 145 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 M0QYG6 137 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 FABP7O15540 132 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 SCTP09683 121 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 GSTT2P0CG29 244 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 AKAIN1P0CW23 69 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 HOXB4P17483 251 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 PRTN3P24158 256 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 TAS2R46P59540 309 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 HMGN3Q15651 99 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 SRSF7Q16629 238 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 GPR157Q5UAW9 335 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 STEAP1BQ6NZ63 245 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 Q6ZS49 121 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 OR4D10Q8NGI6 311 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 OR5H2Q8NGV7 314 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 SUCNR1Q9BXA5 334 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 TAF9BQ9HBM6 251 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 TMEM160Q9NX00 188 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 ZNF107Q9UII5 783 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 RNASEK-C17orf49H0YIS7 233 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 RBP4P02753 201 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 CGB3P0DN86 165 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 CGB7P0DN87 165 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 ACTBL2Q562R1 376 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 RNASE10Q5GAN6 216 aaKnown RBP16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 KLF17Q5JT82 389 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 HEPN1Q6WQI6 88 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 OR5AP2Q8NGF4 316 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 OR4C16Q8NGL9 310 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 OR1L1Q8NH94 360 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 IL1F10Q8WWZ1 152 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 KIRREL1Q96J84 757 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 TINAGL1Q9GZM7 467 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 IDI2-AS1Q9NZ38 188 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 CDC42EP3Q9UKI2 254 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 TBC1D24Q9ULP9 559 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 SESN1Q9Y6P5 492 aa16.29■□□□□ 0.2
TRAPPC12-220ENST00000482645 CENPVL3A0A0U1RRI6 287 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 C15orf65H3BRN8 121 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 SPINT2O43291 252 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 RAB3DO95716 219 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 IGHV3-7P01780 117 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 HBZP02008 142 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 RUSC1-AS1Q66K80 236 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 NCR3LG1Q68D85 454 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 BRD3OSQ6XYD6 125 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 PNKDQ8N490 385 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 TNFRSF14Q92956 283 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 MCUBQ9NWR8 336 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 EHFQ9NZC4 300 aa16.28■□□□□ 0.2
TRAPPC12-220ENST00000482645 ZFHX3Q15911 3703 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 IGHV3-43A0A0B4J1X8 118 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 BET1O15155 118 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 CD74P04233 296 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 IGHV3-43DP0DP04 118 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 TBPP20226 339 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 FAUP35544 74 aaKnown RBP16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 OR3A3P47888 321 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 DEFA1P59665 94 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 DEFA3P59666 94 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 HERPUD1Q15011 391 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 CDK10Q15131 360 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 IGSF11Q5DX21 431 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 TEX29Q8N6K0 151 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 OR4A4PQ8NGN8 299 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 C22orf15Q8WYQ4 148 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 LEAP2Q969E1 77 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 TMEM133Q9H2Q1 129 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 HEXA-AS1Q9H8Q6 139 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 UNKLQ9H9P5 680 aaKnown RBP16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 HRASLSQ9HDD0 168 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 NECAP2Q9NVZ3 263 aa16.27■□□□□ 0.2
TRAPPC12-220ENST00000482645 FN1P02751 2386 aaKnown RBP16.27■□□□□ 0.19
TRAPPC12-220ENST00000482645 NPIPB11E5RHQ5 1161 aa16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 SDCBPO00560 298 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 LYRM1O43325 122 aa16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 RFX2P48378 723 aa16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 ASAH1Q13510 395 aa16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 OR13D1Q8NGV5 346 aa16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 C11orf54Q9H0W9 315 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 RAB9BQ9NP90 201 aa16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 NUP50Q9UKX7 468 aa16.26■□□□□ 0.19
TRAPPC12-220ENST00000482645 IGKV1-6A0A0C4DH72 117 aa16.25■□□□□ 0.19
TRAPPC12-220ENST00000482645 CENPXA8MT69 81 aa16.25■□□□□ 0.19
TRAPPC12-220ENST00000482645 PLA2G10O15496 165 aa16.25■□□□□ 0.19
TRAPPC12-220ENST00000482645 AMY2AP04746 511 aa16.25■□□□□ 0.19
TRAPPC12-220ENST00000482645 SRD5A1P18405 259 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms