RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 HSPA12AO43301 675 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 IGLV2-14P01704 120 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 S100A12P80511 92 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 BAXQ07812 192 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 TMEM267Q0VDI3 215 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-220ENST00000482507 RNPS1Q15287 305 aaKnown RBP12.62□□□□□ -0.39
ATG4B-220ENST00000482507 HEPN1Q6WQI6 88 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 FDCSPQ8NFU4 85 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 TTTY12Q9BZ98 90 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 SMDT1Q9H4I9 107 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-220ENST00000482507 SCAF4O95104 1147 aaKnown RBP12.62□□□□□ -0.39
ATG4B-220ENST00000482507 CTXN2P0C2S0 81 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 SMIM6P0DI80 62 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 MMP9P14780 707 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 ZNF343Q6P1L6 599 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 ZNF880Q6PDB4 577 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 H1FOOQ8IZA3 346 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-220ENST00000482507 IL22RA2Q969J5 263 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 ATP5SQ99766 215 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 OR2W1Q9Y3N9 320 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 MMP24Q9Y5R2 645 aa12.62□□□□□ -0.39
ATG4B-220ENST00000482507 LINC00587B1AMM8 73 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 S100A8P05109 93 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 CLDND2Q8NHS1 167 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 APH1AQ96BI3 265 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 GNPNAT1Q96EK6 184 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-220ENST00000482507 PRSS50Q9UI38 385 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 DSPP15924 2871 aaKnown RBP12.61□□□□□ -0.39
ATG4B-220ENST00000482507 TRBV6-6A0A0A6YYG2 114 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 WRBO00258 174 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 CLN5O75503 358 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 TAS2R30P59541 319 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 HLA-DRB3P79483 266 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 ZNF506Q5JVG8 444 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 SPATA46Q5T0L3 261 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 MYPOPQ86VE0 399 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-220ENST00000482507 FAM58AQ8N1B3 248 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 TMEM251Q8N6I4 163 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 UBALD1Q8TB05 177 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 IL1F10Q8WWZ1 152 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 HIST1H2AAQ96QV6 131 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 PIEZO2Q9H5I5 2752 aa12.61□□□□□ -0.39
ATG4B-220ENST00000482507 TXNL1O43396 289 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 SYNGR4O95473 234 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 CA6P23280 308 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 ARL16Q0P5N6 197 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 IL24Q13007 206 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 OR1C1Q15619 314 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 AKR1C8PQ5T2L2 129 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 OR2T2Q6IF00 324 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 P4HA3Q7Z4N8 544 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 THNSL2Q86YJ6 484 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 OR10J5Q8NHC4 309 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 GTF3AQ92664 365 aaKnown RBP12.6□□□□□ -0.39
ATG4B-220ENST00000482507 DNAJC13O75165 2243 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 ESPL1Q14674 2120 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 ZNF891A8MT65 544 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-220ENST00000482507 AP4M1O00189 453 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 PPIHO43447 177 aaKnown RBP12.6□□□□□ -0.39
ATG4B-220ENST00000482507 DLK1P80370 383 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 NCMAPQ5T1S8 102 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 ZNF429Q86V71 674 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 FAM122AQ96E09 287 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 CABLES2Q9BTV7 478 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 RSG1Q9BU20 258 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 VSIRQ9H7M9 311 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 GSN-AS1Q9NRJ2 163 aa12.6□□□□□ -0.39
ATG4B-220ENST00000482507 MAP1BP46821 2468 aaKnown RBP12.6□□□□□ -0.39
ATG4B-220ENST00000482507 A0A1W2PR80 420 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 CXCL1P09341 107 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 ARR3P36575 388 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 TAGLN2P37802 199 aaKnown RBP12.59□□□□□ -0.39
ATG4B-220ENST00000482507 TESK1Q15569 626 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 Q6P435 159 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 OR51I2Q9H344 312 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 RIMS4Q9H426 269 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-220ENST00000482507 NIT2Q9NQR4 276 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 RYDENQ9NUL5 291 aaKnown RBP12.59□□□□□ -0.39
ATG4B-220ENST00000482507 WSB1Q9Y6I7 421 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 ANKRD30BLA7E2S9 258 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 IL18BPO95998 194 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 IGKV1-5P01602 117 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 SERPINE2P07093 398 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 PLA2G5P39877 138 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 ERVFRD-1P60508 538 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 UBE2KP61086 200 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 GNG3P63215 75 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 SSX7Q7RTT5 188 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 WDR86Q86TI4 376 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 HAPLN4Q86UW8 402 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 C1QL4Q86Z23 238 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 SPACA3Q8IXA5 215 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 PRR18Q8N4B5 295 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 Q8WTZ3 238 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 PLK3Q9H4B4 646 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 C12orf49Q9H741 205 aa12.59□□□□□ -0.39
ATG4B-220ENST00000482507 B4GALT7Q9UBV7 327 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms