RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 COX7A1P24310 79 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 SYNJ2BPP57105 145 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 UBE2NP61088 152 aaKnown RBP6.15□□□□□ -1.42
LSM5-210ENST00000480956 KLF9Q13886 244 aaPredicted RBP6.15□□□□□ -1.42
LSM5-210ENST00000480956 C16orf72Q14CZ0 275 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 EBPQ15125 230 aaKnown RBP6.15□□□□□ -1.42
LSM5-210ENST00000480956 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
LSM5-210ENST00000480956 SLC25A30Q5SVS4 291 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 STPG1Q5TH74 334 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 LPCAT3Q6P1A2 487 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 PLET1Q6UQ28 207 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 ZNF614Q8N883 585 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 OR52L1Q8NGH7 329 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 CD200R1Q8TD46 325 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.42
LSM5-210ENST00000480956 ZNF689Q96CS4 500 aaPredicted RBP6.15□□□□□ -1.42
LSM5-210ENST00000480956 SLC35G5Q96KT7 338 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 RNF157Q96PX1 679 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 GPER1Q99527 375 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 GNB1LQ9BYB4 327 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 SLC17A9Q9BYT1 436 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 HES4Q9HCC6 221 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 SLCO1B3Q9NPD5 702 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 ZNF780BQ9Y6R6 833 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 ENPP4Q9Y6X5 453 aa6.15□□□□□ -1.42
LSM5-210ENST00000480956 LMO7Q8WWI1 1683 aa6.15□□□□□ -1.43
LSM5-210ENST00000480956 LRP6O75581 1613 aa6.15□□□□□ -1.43
LSM5-210ENST00000480956 FAM208AQ9UK61 1670 aaKnown RBP6.14□□□□□ -1.43
LSM5-210ENST00000480956 MAP1LC3B2A6NCE7 125 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 SLC17A3O00476 420 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 MFSD11O43934 449 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 PFN1P07737 140 aaKnown RBP6.14□□□□□ -1.43
LSM5-210ENST00000480956 MAP2K4P45985 399 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 CCR6P51684 374 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 SRSF4Q08170 494 aaKnown RBP6.14□□□□□ -1.43
LSM5-210ENST00000480956 LRRC10Q5BKY1 277 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 TMEM78Q5T7P6 136 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 RPL13AP3Q6NVV1 102 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 RFLNAQ6ZTI6 216 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 ZBTB8OSQ8IWT0 167 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 ST6GALNAC3Q8NDV1 305 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 RPL36ALQ969Q0 106 aaKnown RBP6.14□□□□□ -1.43
LSM5-210ENST00000480956 MS4A8Q9BY19 250 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 MAP1LC3BQ9GZQ8 125 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 WFDC1Q9HC57 220 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 ASB4Q9Y574 426 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 FLVCR1Q9Y5Y0 555 aa6.14□□□□□ -1.43
LSM5-210ENST00000480956 TRAV8-3A0A0A6YYJ7 113 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 PLAC8L1A1L4L8 177 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 C5orf49A4QMS7 147 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 PMS2P5A8MQ11 134 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 DUSP14O95147 198 aaKnown RBP6.13□□□□□ -1.43
LSM5-210ENST00000480956 CRYZL1O95825 349 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 ZBTB25P24278 435 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 CDKN2BP42772 138 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 LINC01547P58512 204 aaPredicted RBP6.13□□□□□ -1.43
LSM5-210ENST00000480956 TPI1P60174 286 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 PAX8Q06710 450 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 PNOCQ13519 176 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 LEMD1Q68G75 181 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 FBXL22Q6P050 247 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 FBXW12Q6X9E4 464 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 OOSP2Q86WS3 158 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 OR10G6Q8NH81 332 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 NPRL2Q8WTW4 380 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 CDX2Q99626 313 aaPredicted RBP6.13□□□□□ -1.43
LSM5-210ENST00000480956 MRPL20Q9BYC9 149 aaKnown RBP6.13□□□□□ -1.43
LSM5-210ENST00000480956 ZDHHC11Q9H8X9 412 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 LRTM1Q9HBL6 345 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 PLSCR3Q9NRY6 295 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 C14orf105Q9NVL8 296 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 MARCH5Q9NX47 278 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 F11RQ9Y624 299 aaKnown RBP6.13□□□□□ -1.43
LSM5-210ENST00000480956 RTL1A6NKG5 1358 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 COL5A2P05997 1499 aaPredicted RBP6.13□□□□□ -1.43
LSM5-210ENST00000480956 COL14A1Q05707 1796 aaKnown RBP6.13□□□□□ -1.43
LSM5-210ENST00000480956 NRAPQ86VF7 1730 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 IGKV1-8A0A0C4DH67 115 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 COPEO14579 308 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 FFAR1O14842 300 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 PFDN1O60925 122 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 MMP23AO75900 390 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 SLC25A1P53007 311 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 GFERP55789 205 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 IAH1Q2TAA2 248 aaPredicted RBP6.13□□□□□ -1.43
LSM5-210ENST00000480956 KLHL12Q53G59 568 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 MESTQ5EB52 335 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 FAM201AQ5SY85 155 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 NANOGP8Q6NSW7 305 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 DCUN1D2Q6PH85 259 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 STRADAQ7RTN6 431 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 ABHD3Q8WU67 409 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 BMFQ96LC9 184 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 OLFM3Q96PB7 478 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 Q9H3A6 140 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 NANOGQ9H9S0 305 aa6.13□□□□□ -1.43
LSM5-210ENST00000480956 MEGF6O75095 1541 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 LOC389332A0A1B0GUA5 103 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 A0A1B0GV50 99 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 LINC00587B1AMM8 73 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms