RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 SHISA7A6NL88 538 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 SIAH2O43255 324 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 PITX3O75364 302 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 G6PCP35575 357 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 UBALD2Q8IYN6 164 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 AGBL5Q8NDL9 886 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 OR5B3Q8NH48 314 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 BOD1Q96IK1 185 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 A0A1W2PQD3 144 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 ZIC3O60481 467 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 EFEMP2O95967 443 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 HLA-GP17693 338 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 OR3A1P47881 315 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 TAS2R60P59551 318 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 ZNF573Q86YE8 665 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 OR2D2Q9H210 308 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 DUSP3P51452 185 aaPredicted RBP11.7□□□□□ -0.54
USP42-206ENST00000479544 FHL1Q13642 323 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 CDPF1Q6NVV7 123 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 CYYR1Q96J86 154 aa11.7□□□□□ -0.54
USP42-206ENST00000479544 CYB561P49447 251 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 HIKESHIQ53FT3 197 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 H1FOOQ8IZA3 346 aaPredicted RBP11.69□□□□□ -0.54
USP42-206ENST00000479544 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
USP42-206ENST00000479544 CIB3Q96Q77 187 aaPredicted RBP11.69□□□□□ -0.54
USP42-206ENST00000479544 DUSP23Q9BVJ7 150 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 IGKV1-9A0A0C4DH69 117 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 SPINT2O43291 252 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 FCGR3BO75015 233 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 MPLP40238 635 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 ELOBQ15370 118 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 RNASEKQ6P5S7 137 aaKnown RBP11.69□□□□□ -0.54
USP42-206ENST00000479544 TPRX1Q8N7U7 411 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 ABHD3Q8WU67 409 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 NAGKQ9UJ70 344 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 TUBD1Q9UJT1 453 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 PSG11Q9UQ72 335 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 TCF20Q9UGU0 1960 aaKnown RBP11.69□□□□□ -0.54
USP42-206ENST00000479544 GLB1P16278 677 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 TCTAP57738 103 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 OR10G8Q8NGN5 311 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 FZR1Q9UM11 496 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 MUC6Q6W4X9 2439 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 NGFP01138 241 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 OR10J1P30954 320 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 NOL4LQ96MY1 436 aaPredicted RBP11.69□□□□□ -0.54
USP42-206ENST00000479544 SH3BGRL2Q9UJC5 107 aa11.69□□□□□ -0.54
USP42-206ENST00000479544 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 CCL3P10147 92 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 CCKARP32238 428 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 WNT5AP41221 380 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 GPR12P47775 334 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 HINT1P49773 126 aaPredicted RBP11.68□□□□□ -0.54
USP42-206ENST00000479544 GAB4Q2WGN9 574 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 ZNF818PQ6ZRF7 136 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 VOPP1Q96AW1 172 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 GPR146Q96CH1 333 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 BOKQ9UMX3 212 aaPredicted RBP11.68□□□□□ -0.54
USP42-206ENST00000479544 HS3ST3B1Q9Y662 390 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 IRF2P14316 349 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 ALKBH6Q3KRA9 238 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 GUSBP11Q6P575 273 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 ERASQ7Z444 233 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 MRGPRDQ8TDS7 321 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 MUCL1Q96DR8 90 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 SRD5A3Q9H8P0 318 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 LRRK1Q38SD2 2015 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 C5orf67F2Z3F1 127 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 SH2D1BO14796 132 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 WISP1O95388 367 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 F2RP25116 425 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 LSM6P62312 80 aaKnown RBP11.68□□□□□ -0.54
USP42-206ENST00000479544 HERPUD1Q15011 391 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 OR4X1Q8NH49 305 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 ABHD5Q8WTS1 349 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 GALMQ96C23 342 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 C14orf144Q96I85 54 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 DEFB127Q9H1M4 99 aa11.68□□□□□ -0.54
USP42-206ENST00000479544 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
USP42-206ENST00000479544 LYRM2Q9NU23 88 aaPredicted RBP11.68□□□□□ -0.54
USP42-206ENST00000479544 ABCA4P78363 2273 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 A6NNC1 897 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 TRAF3IP2O43734 574 aaPredicted RBP11.67□□□□□ -0.54
USP42-206ENST00000479544 OR5G3P0C626 314 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 COTL1Q14019 142 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 OR10D3Q8NH80 312 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 ZNF837Q96EG3 531 aaPredicted RBP11.67□□□□□ -0.54
USP42-206ENST00000479544 HIST1H2BLQ99880 126 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 GINS3Q9BRX5 216 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 ZNF581Q9P0T4 197 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 ARHGAP21Q5T5U3 1957 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 PIAS2O75928 621 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 IGHV4-34P06331 123 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 OR10J4P0C629 311 aa11.67□□□□□ -0.54
USP42-206ENST00000479544 FOXO1Q12778 655 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms