RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 BET1LQ9NYM9 111 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 FCGR3BO75015 233 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 CA11O75493 328 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 OR2A4O95047 310 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 AGFG2O95081 481 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 RFPL3SP0C7P2 107 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 CRISP2P16562 243 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 OR2A7Q96R45 310 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 ZNF318Q5VUA4 2279 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 GOLGB1Q14789 3259 aaKnown RBP12.41□□□□□ -0.42
COL20A1-206ENST00000479501 DBX1A6NMT0 343 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 C3orf80F5H4A9 247 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 CHST1O43916 411 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 TRAT1Q6PIZ9 186 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 OR10G4Q8NGN3 311 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 OR10G9Q8NGN4 311 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 OR10G7Q8NGN6 311 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 OR2W1Q9Y3N9 320 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 NKX2-6A6NCS4 301 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 ZIC3O60481 467 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 DEFA4P12838 97 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 CNN1P51911 297 aaKnown RBP12.41□□□□□ -0.42
COL20A1-206ENST00000479501 NUDT16L1Q9BRJ7 211 aaKnown RBP12.41□□□□□ -0.42
COL20A1-206ENST00000479501 PPP1R14DQ9NXH3 145 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 M0QZK8 103 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 GGCTO75223 188 aaKnown RBP12.4□□□□□ -0.42
COL20A1-206ENST00000479501 HAND1O96004 215 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 SLC25A53Q5H9E4 307 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 Q6ZN92 141 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 TMEM54Q969K7 222 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 YTHDF2Q9Y5A9 579 aaKnown RBP12.4□□□□□ -0.42
COL20A1-206ENST00000479501 DOCK9Q9BZ29 2069 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 SYNGR2O43760 224 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 FGF2P09038 288 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 FGF12P61328 243 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 FAM3AP98173 230 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 UNC119Q13432 240 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 TMEM108Q6UXF1 575 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 FUT9Q9Y231 359 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 LOC105371267A0A1B0GV96 52 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 LNP1A1A4G5 178 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 PMELP40967 661 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 LGALS4P56470 323 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 BHLHA15Q7RTS1 189 aaPredicted RBP12.4□□□□□ -0.42
COL20A1-206ENST00000479501 TIMD4Q96H15 378 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 WNT5BQ9H1J7 359 aa12.4□□□□□ -0.42
COL20A1-206ENST00000479501 NKX2-8O15522 239 aa12.4□□□□□ -0.43
COL20A1-206ENST00000479501 CDC34P49427 236 aaPredicted RBP12.4□□□□□ -0.43
COL20A1-206ENST00000479501 ERHP84090 104 aaKnown RBP12.4□□□□□ -0.43
COL20A1-206ENST00000479501 SLC36A1Q7Z2H8 476 aa12.4□□□□□ -0.43
COL20A1-206ENST00000479501 OR4A4PQ8NGN8 299 aa12.4□□□□□ -0.43
COL20A1-206ENST00000479501 MRPL13Q9BYD1 178 aaKnown RBP12.4□□□□□ -0.43
COL20A1-206ENST00000479501 TP53BP1Q12888 1972 aaPredicted RBP12.39□□□□□ -0.43
COL20A1-206ENST00000479501 ACP1P24666 158 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 SULT1A2P50226 295 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 TNFAIP6P98066 277 aaPredicted RBP12.39□□□□□ -0.43
COL20A1-206ENST00000479501 HES1Q14469 280 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 LYG1Q8N1E2 194 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 FADS6Q8N9I5 356 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 SLC2A8Q9NY64 477 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 VAX2Q9UIW0 290 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 HSF4Q9ULV5 492 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF154Q13106 437 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 Q96M66 194 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 GINS3Q9BRX5 216 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 SERTM2A0A1B0GWG4 89 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 CNIH1O95406 144 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 GYPAP02724 150 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 UMODP07911 640 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 P2RY4P51582 365 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL20A1-206ENST00000479501 OR5I1Q13606 314 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 RNASEKQ6P5S7 137 aaKnown RBP12.39□□□□□ -0.43
COL20A1-206ENST00000479501 TIPARPQ7Z3E1 657 aaKnown RBP12.39□□□□□ -0.43
COL20A1-206ENST00000479501 LINC00596Q86U02 117 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF835Q9Y2P0 537 aa12.39□□□□□ -0.43
COL20A1-206ENST00000479501 FRMPD3Q5JV73 1810 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 PAX5Q02548 391 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 STPG1Q5TH74 334 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 ATP5SQ99766 215 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 OR5AC2Q9NZP5 309 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 ZNF253O75346 499 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 IGHV3-13P01766 116 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 IGHV3-7P01780 117 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 ATP6V0CP27449 155 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 LAMTOR1Q6IAA8 161 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 RSPO3Q9BXY4 272 aaPredicted RBP12.38□□□□□ -0.43
COL20A1-206ENST00000479501 ROS1P08922 2347 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 A0A1B0GTI1 187 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 FTH1P19P0C7X4 201 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 HLA-GP17693 338 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 ZP1P60852 638 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 KCNMB1Q16558 191 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 KLHDC3Q9BQ90 382 aa12.38□□□□□ -0.43
COL20A1-206ENST00000479501 OR6C3Q9NZP0 311 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms