RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GNG12Q9UBI6 72 aa13.25□□□□□ -0.29
VHL-203ENST00000477538 ZNF107Q9UII5 783 aaPredicted RBP13.25□□□□□ -0.29
VHL-203ENST00000477538 JPT1Q9UK76 154 aa13.25□□□□□ -0.29
VHL-203ENST00000477538 KCNS2Q9ULS6 477 aa13.25□□□□□ -0.29
VHL-203ENST00000477538 F8P00451 2351 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 ZNF736B4DX44 427 aaPredicted RBP13.24□□□□□ -0.29
VHL-203ENST00000477538 J3QRK9 145 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 HSPA12AO43301 675 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 DIRAS3O95661 229 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 CTXN2P0C2S0 81 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 HRH1P35367 487 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 OR3A3P47888 321 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 TAS2R19P59542 299 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 PRB3Q04118 309 aaPredicted RBP13.24□□□□□ -0.29
VHL-203ENST00000477538 GNMTQ14749 295 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 CDK10Q15131 360 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 TRIQKQ629K1 86 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 CCDC32Q9BV29 185 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 TMEM133Q9H2Q1 129 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 NECAP2Q9NVZ3 263 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 OR1A1Q9P1Q5 309 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 HIVEP1P15822 2718 aa13.24□□□□□ -0.29
VHL-203ENST00000477538 TRBV6-7A0A0A0MS04 114 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 ANKRD20A5PA0PJZ0 165 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 PMP2P02689 132 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 CD3DP04234 171 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 IL7P13232 177 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 HOXB4P17483 251 aaPredicted RBP13.23□□□□□ -0.29
VHL-203ENST00000477538 ZBTB25P24278 435 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 PPP1CCP36873 323 aaKnown RBP13.23□□□□□ -0.29
VHL-203ENST00000477538 INPP1P49441 399 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 KLRD1Q13241 179 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 ACTBL2Q562R1 376 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 NCR3LG1Q68D85 454 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 FAM53AQ6NSI3 398 aaPredicted RBP13.23□□□□□ -0.29
VHL-203ENST00000477538 TOMM5Q8N4H5 51 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 OR10V1Q8NGI7 309 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 OR10J5Q8NHC4 309 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 LEAP2Q969E1 77 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 UPRTQ96BW1 309 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 SMR3AQ99954 134 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 GINS4Q9BRT9 223 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 HEXA-AS1Q9H8Q6 139 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 EHFQ9NZC4 300 aa13.23□□□□□ -0.29
VHL-203ENST00000477538 SONP18583 2426 aaKnown RBP13.22□□□□□ -0.29
VHL-203ENST00000477538 A0A087X0M5 115 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 A0A1B0GX30 115 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 M0QYG6 137 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 RGS11O94810 467 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 AVPP01185 164 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 IGHV3-7P01780 117 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 CD74P04233 296 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 OR5H8P0DN80 308 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 TBPP20226 339 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 COX7A1P24310 79 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 CD34P28906 385 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 RFX2P48378 723 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 AP3S2P59780 193 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 RNASE10Q5GAN6 216 aaKnown RBP13.22□□□□□ -0.29
VHL-203ENST00000477538 UTF1Q5T230 341 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 ZNF57Q68EA5 555 aaPredicted RBP13.22□□□□□ -0.29
VHL-203ENST00000477538 STEAP1BQ6NZ63 245 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 PNKDQ8N490 385 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 OR13D1Q8NGV5 346 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 TNFRSF14Q92956 283 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 LHX4Q969G2 390 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 CLEC7AQ9BXN2 247 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 YAE1D1Q9NRH1 226 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 ZNF69Q9UC07 566 aa13.22□□□□□ -0.29
VHL-203ENST00000477538 IGHV2-26A0A0B4J1V2 119 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 TRAV40A0A0B4J280 105 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 RNASEK-C17orf49H0YIS7 233 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 YPEL1O60688 119 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 RAB3DO95716 219 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 LY6G6DO95868 133 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 AKAIN1P0CW23 69 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 CEACAM6P40199 344 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 GNG10P50151 68 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 DYRK1AQ13627 763 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 KLF9Q13886 244 aaPredicted RBP13.21□□□□□ -0.29
VHL-203ENST00000477538 MORN2Q502X0 79 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 HCP5Q6MZN7 132 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 C1orf229Q6ZS94 237 aaPredicted RBP13.21□□□□□ -0.29
VHL-203ENST00000477538 OVCH2Q7RTZ1 564 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 PDZD9Q8IXQ8 264 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 H1FOOQ8IZA3 346 aaPredicted RBP13.21□□□□□ -0.29
VHL-203ENST00000477538 ABHD12Q8N2K0 398 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 YPEL2Q96QA6 119 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 TINAGL1Q9GZM7 467 aaPredicted RBP13.21□□□□□ -0.29
VHL-203ENST00000477538 RDH8Q9NYR8 311 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 PSG11Q9UQ72 335 aa13.21□□□□□ -0.29
VHL-203ENST00000477538 A8MV72 311 aaPredicted RBP13.2□□□□□ -0.3
VHL-203ENST00000477538 NFYAP23511 347 aaPredicted RBP13.2□□□□□ -0.3
VHL-203ENST00000477538 MEF2DQ14814 521 aa13.2□□□□□ -0.3
VHL-203ENST00000477538 Q3ZCU0 254 aa13.2□□□□□ -0.3
VHL-203ENST00000477538 LY6G6FQ5SQ64 297 aa13.2□□□□□ -0.3
VHL-203ENST00000477538 VAX1Q5SQQ9 334 aa13.2□□□□□ -0.3
VHL-203ENST00000477538 OR4D10Q8NGI6 311 aa13.2□□□□□ -0.3
VHL-203ENST00000477538 OR4C16Q8NGL9 310 aa13.2□□□□□ -0.3
VHL-203ENST00000477538 OR9G1Q8NH87 305 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms