RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 CLEC18CQ8NCF0 446 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 OR5T2Q8NGG2 359 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 OR10V1Q8NGI7 309 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 LILRB4Q8NHJ6 448 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 LRRC20Q8TCA0 184 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 DYRK2Q92630 601 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 TOMM40LQ969M1 308 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 GALMQ96C23 342 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 MSI2Q96DH6 328 aaKnown RBP5.6□□□□□ -1.51
LDB3-206ENST00000477489 WDR89Q96FK6 387 aaPredicted RBP5.6□□□□□ -1.51
LDB3-206ENST00000477489 SDSLQ96GA7 329 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 C18orf12Q96KH6 178 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ZNF488Q96MN9 340 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 AQP10Q96PS8 301 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 OR2V2Q96R30 315 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 MRPL37Q9BZE1 423 aaKnown RBP5.6□□□□□ -1.51
LDB3-206ENST00000477489 EGLN1Q9GZT9 426 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 SLC5A7Q9GZV3 580 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 TMEM222Q9H0R3 208 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 MS4A5Q9H3V2 200 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 LIME1Q9H400 295 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 MSL2Q9HCI7 577 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 OR6C3Q9NZP0 311 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ZNF581Q9P0T4 197 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 RNF7Q9UBF6 113 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 IL36RNQ9UBH0 155 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 LAMP3Q9UQV4 416 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 TLN1Q9Y490 2541 aaKnown RBP5.59□□□□□ -1.51
LDB3-206ENST00000477489 SPTAN1Q13813 2472 aaKnown RBP5.59□□□□□ -1.51
LDB3-206ENST00000477489 RP1L1Q8IWN7 2480 aaPredicted RBP5.59□□□□□ -1.51
LDB3-206ENST00000477489 TRGV8A0A0C4DH27 118 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 IGKV1-6A0A0C4DH72 117 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 C13orf42A0A1B0GVH6 325 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 FAM221AA4D161 298 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 RNF222A6NCQ9 220 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 DPRXA6NFQ7 191 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 C17orf100A8MU93 164 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 FAM25EA8MYX2 175 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 B9A039 149 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 ABCD4O14678 606 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 SPINT2O43291 252 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 BCL2L11O43521 198 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 ZNF737O75373 536 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 IGHV1-46P01743 117 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 THBDP07204 575 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 OR5AC1P0C628 307 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 MMP9P14780 707 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 CXCL2P19875 107 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 AGAP20933 346 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 VDAC1P21796 283 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 F2RP25116 425 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 GNRHRP30968 328 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 PRDX2P32119 198 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 OR3A1P47881 315 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 ARHGDIBP52566 201 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 FXYD4P59646 89 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 SNRPD2P62316 118 aaKnown RBP5.59□□□□□ -1.51
LDB3-206ENST00000477489 TNFAIP6P98066 277 aaPredicted RBP5.59□□□□□ -1.51
LDB3-206ENST00000477489 Q3ZCU0 254 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 BEX5Q5H9J7 111 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 GPR157Q5UAW9 335 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 TEX36Q5VZQ5 186 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 ZNF808Q8N4W9 903 aaPredicted RBP5.59□□□□□ -1.51
LDB3-206ENST00000477489 FAM71E2Q8N5Q1 922 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 GCSAMQ8N6F7 178 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 OR10A7Q8NGE5 316 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 OR8H1Q8NGG4 311 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 STOML3Q8TAV4 291 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 PLPPR1Q8TBJ4 325 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 SCARB1Q8WTV0 552 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 GLYATL2Q8WU03 294 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 NINJ1Q92982 152 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 LSM10Q969L4 123 aaKnown RBP5.59□□□□□ -1.51
LDB3-206ENST00000477489 ARPC5LQ9BPX5 153 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 ARL6Q9H0F7 186 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 PLEKHA2Q9HB19 425 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 TAF9BQ9HBM6 251 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 LIN7CQ9NUP9 197 aaKnown RBP5.59□□□□□ -1.51
LDB3-206ENST00000477489 MED9Q9NWA0 146 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 LPAR3Q9UBY5 353 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 CACFD1Q9UGQ2 172 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 KIF25Q9UIL4 384 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 JPT1Q9UK76 154 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 GAB2Q9UQC2 676 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 ATMQ13315 3056 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 PLCE1Q9P212 2302 aa5.59□□□□□ -1.51
LDB3-206ENST00000477489 RELNP78509 3460 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 LINC00862A6NCI5 91 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 E5RGE8 158 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 K7N7A8 449 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 CCSO14618 274 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 BET1O15155 118 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 ST8SIA3O43173 380 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 PHF1O43189 567 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 HSPA12AO43301 675 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 NDUFA2O43678 99 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 EIF4EBP3O60516 100 aaPredicted RBP5.58□□□□□ -1.52
LDB3-206ENST00000477489 PSPNO60542 156 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 GOSR1O95249 250 aa5.58□□□□□ -1.52
LDB3-206ENST00000477489 LY86O95711 162 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms