RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CLINT1Q14677 625 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 GINS1Q14691 196 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 RGNQ15493 299 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 TMEM52BQ4KMG9 183 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 TP53I3Q53FA7 332 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 CLEC12AQ5QGZ9 265 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 C1orf195Q5TG92 126 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 SPATA31B1PQ5VZV4 182 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 OTPQ5XKR4 325 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 RPL22L1Q6P5R6 122 aaKnown RBP1.96□□□□□ -2.1
XRN1-211ENST00000477237 C12orf54Q6X4T0 127 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 HIST2H3AQ71DI3 136 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 ZNF720Q7Z2F6 126 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 NEGR1Q7Z3B1 354 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 IFNEQ86WN2 208 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 CBLN2Q8IUK8 224 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 OR8I2Q8N0Y5 310 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 HIST3H2BBQ8N257 126 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 YIPF7Q8N8F6 280 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 ZNF740Q8NDX6 193 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 PLPP5Q8NEB5 264 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 KLHL30-AS1Q8NEE0 82 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 OR10D4PQ8NGN7 298 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 OR6K6Q8NGW6 343 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 OR51Q1Q8NH59 317 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 PIFOQ8TCI5 191 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 GPR148Q8TDV2 347 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 RDH5Q92781 318 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 UBE2E3Q969T4 207 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 PYCR2Q96C36 320 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 DCUN1D1Q96GG9 259 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 LINC00477Q96M19 166 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 SIGLEC12Q96PQ1 595 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 TSPAN32Q96QS1 320 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 OR2M4Q96R27 311 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 TRIB3Q96RU7 358 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 S1PR3Q99500 378 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 NRTNQ99748 197 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 MRPL57Q9BQC6 102 aaKnown RBP1.96□□□□□ -2.1
XRN1-211ENST00000477237 SLC17A9Q9BYT1 436 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 OR8D2Q9GZM6 311 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 ZBP1Q9H171 429 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 TMEM133Q9H2Q1 129 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 CPVLQ9H3G5 476 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 TUBA4BQ9H853 241 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 Q9H8V8 135 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 GNB4Q9HAV0 340 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 POPDC3Q9HBV1 291 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 GPR84Q9NQS5 396 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 C1orf123Q9NWV4 160 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 HRASLS2Q9NWW9 162 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 SPANXCQ9NY87 97 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 DOK5Q9P104 306 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 ZNF319Q9P2F9 582 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 RPS6KB2Q9UBS0 482 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 PILRAQ9UKJ1 303 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 MMP17Q9ULZ9 603 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 WIPI2Q9Y4P8 454 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 SYNJ1O43426 1573 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 CEP170BQ9Y4F5 1589 aaPredicted RBP1.96□□□□□ -2.1
XRN1-211ENST00000477237 NUP210LQ5VU65 1888 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 CUX1P39880 1505 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 HMGXB3Q12766 1538 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 FRMPD3Q5JV73 1810 aa1.96□□□□□ -2.1
XRN1-211ENST00000477237 CHD4Q14839 1912 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 ADAMTSL1Q8N6G6 1762 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 MADDQ8WXG6 1647 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 ITSN1Q15811 1721 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 IFT172Q9UG01 1749 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 GLI3P10071 1580 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 UGGT1Q9NYU2 1555 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 DIP2BQ9P265 1576 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 DCCP43146 1447 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 PRG4Q92954 1404 aaPredicted RBP1.95□□□□□ -2.1
XRN1-211ENST00000477237 TRAV18A0A075B6X5 111 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 IQCMA0A1B0GVH7 501 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 MED19A0JLT2 244 aaPredicted RBP1.95□□□□□ -2.1
XRN1-211ENST00000477237 TSPAN11A1L157 253 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 FAM166BA8MTA8 275 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 IDSB3KWA1 339 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 TRIM49D1C9J1S8 452 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 INMT-MINDY4F8WBC2 141 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 H7BYZ3 331 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.95□□□□□ -2.1
XRN1-211ENST00000477237 MFNGO00587 321 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 HSD17B6O14756 317 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 SNAPC5O75971 98 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 GABARAPO95166 117 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 AIFM1O95831 613 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 CA1P00915 261 aaPredicted RBP1.95□□□□□ -2.1
XRN1-211ENST00000477237 GCGP01275 180 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 DBIP07108 87 aaKnown RBP1.95□□□□□ -2.1
XRN1-211ENST00000477237 H2BFMP0C1H6 154 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 CT45A6P0DMU7 189 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 CT45A5P0DMU8 189 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 CT45A7P0DMV0 189 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 GZMBP10144 247 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 PVRP15151 417 aa1.95□□□□□ -2.1
XRN1-211ENST00000477237 ZNF14P17017 642 aaPredicted RBP1.95□□□□□ -2.1
XRN1-211ENST00000477237 ZNF19P17023 458 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms