RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 LINC00311Q8N616 119 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 DRAM1Q8N682 238 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 C8orf31Q8N9H6 132 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 OR4F17Q8NGA8 305 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 OR1L1Q8NH94 360 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 MRPL30Q8TCC3 161 aaKnown RBP12.93□□□□□ -0.34
COL1A1-205ENST00000476387 FCGR1BQ92637 280 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 RBM14Q96PK6 669 aaKnown RBP12.93□□□□□ -0.34
COL1A1-205ENST00000476387 OR4F4Q96R69 305 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 SULT4A1Q9BR01 284 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 NICN1Q9BSH3 213 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 TAF9BQ9HBM6 251 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 CHMP1AQ9HD42 196 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-205ENST00000476387 MBNL3Q9NUK0 354 aaKnown RBP12.93□□□□□ -0.34
COL1A1-205ENST00000476387 V9GY05 133 aa12.93□□□□□ -0.34
COL1A1-205ENST00000476387 M0QZK8 103 aa12.92□□□□□ -0.34
COL1A1-205ENST00000476387 CCRL2O00421 344 aa12.92□□□□□ -0.34
COL1A1-205ENST00000476387 GAPDHP04406 335 aaKnown RBP12.92□□□□□ -0.34
COL1A1-205ENST00000476387 LPLP06858 475 aa12.92□□□□□ -0.34
COL1A1-205ENST00000476387 SNRNP70P08621 437 aaKnown RBP12.92□□□□□ -0.34
COL1A1-205ENST00000476387 UBE2UQ5VVX9 321 aa12.92□□□□□ -0.34
COL1A1-205ENST00000476387 OR10V1Q8NGI7 309 aa12.92□□□□□ -0.34
COL1A1-205ENST00000476387 OCSTAMPQ9BR26 566 aa12.92□□□□□ -0.34
COL1A1-205ENST00000476387 PLEKHJ1Q9NW61 149 aa12.92□□□□□ -0.34
COL1A1-205ENST00000476387 MOB4Q9Y3A3 225 aa12.92□□□□□ -0.34
COL1A1-205ENST00000476387 ADARB2-AS1A8MUL3 147 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 TMEM11P17152 192 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 CLDN12P56749 244 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 ZNF816Q0VGE8 651 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-205ENST00000476387 DIAPH2-AS1Q14236 149 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 TMEM95Q3KNT9 176 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 ABCA11PQ4W5N1 156 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 Q6ZS46 218 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 REC114Q7Z4M0 266 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 MOB3BQ86TA1 216 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 THNSL2Q86YJ6 484 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 SPARTQ8N0X7 666 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 LYG1Q8N1E2 194 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 OR51D1Q8NGF3 324 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 FAM3DQ96BQ1 224 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-205ENST00000476387 FAAP24Q9BTP7 215 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 LPAR5Q9H1C0 372 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 OR2S2Q9NQN1 319 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 STEAP1Q9UHE8 339 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 LRRC42Q9Y546 428 aa12.91□□□□□ -0.34
COL1A1-205ENST00000476387 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 TRAV1-2A0A0B4J238 106 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 IGHV1-3A0A0C4DH29 117 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 TRDV1A0A1B0GX56 115 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 FAM90A9PA6NNJ1 464 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 TXNL1O43396 289 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 GALP22466 123 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 REG1BP48304 166 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 FBLN7Q53RD9 439 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 HES5Q5TA89 166 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 CD200R1LQ6Q8B3 271 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 SLC25A48Q6ZT89 311 aaKnown RBP12.9□□□□□ -0.34
COL1A1-205ENST00000476387 MOB1BQ7L9L4 216 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 SETD6Q8TBK2 473 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 R3HDM4Q96D70 268 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 CYYR1Q96J86 154 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 ABRACLQ9P1F3 81 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 JPT1Q9UK76 154 aa12.9□□□□□ -0.34
COL1A1-205ENST00000476387 SLC31A2O15432 143 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 SOCS1O15524 211 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 RGS11O94810 467 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 IGKV1D-33P01593 117 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 IGKV1-33P01594 117 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 VEGFCP49767 419 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 CD83Q01151 205 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 C9orf152Q5JTZ5 239 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 C22orf42Q6IC83 251 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 FAM53AQ6NSI3 398 aaPredicted RBP12.89□□□□□ -0.35
COL1A1-205ENST00000476387 ZNF773Q6PK81 442 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 ZNF439Q8NDP4 499 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 RTN4IP1Q8WWV3 396 aaPredicted RBP12.89□□□□□ -0.35
COL1A1-205ENST00000476387 GALMQ96C23 342 aa12.89□□□□□ -0.35
COL1A1-205ENST00000476387 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
COL1A1-205ENST00000476387 RAB3BP20337 219 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 OR10A3P58181 314 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 HTD2P86397 168 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 HNF4GQ14541 408 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 GNMTQ14749 295 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 HMGN3Q15651 99 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 C2orf76Q3KRA6 126 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 STEAP3Q658P3 488 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 TGIF2LXQ8IUE1 241 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 FAM89BQ8N5H3 189 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 OR5AU1Q8NGC0 362 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 OR52L2PQ8NGH6 319 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 OR56B1Q8NGI3 324 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 IL1F10Q8WWZ1 152 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 ABHD14AQ9BUJ0 271 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 AK3Q9UIJ7 227 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 HSF4Q9ULV5 492 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 STUB1Q9UNE7 303 aa12.88□□□□□ -0.35
COL1A1-205ENST00000476387 IGHV3-72A0A0B4J1Y9 119 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 TMEM272A0A1B0GTI8 110 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 IFITM5A6NNB3 132 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms