RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 HS3ST1O14792 307 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 SNAPINO95295 136 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 H2AFB1P0C5Y9 115 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 SPP1P10451 314 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 PVALBP20472 110 aaPredicted RBP16.07■□□□□ 0.16
SYF2-204ENST00000476231 S100GP29377 79 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 SMUG1Q53HV7 270 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 PCSK4Q6UW60 755 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 ZNF818PQ6ZRF7 136 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 MOB1BQ7L9L4 216 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 TREM1Q9NP99 234 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 PLA2G2EQ9NZK7 142 aa16.07■□□□□ 0.16
SYF2-204ENST00000476231 IGKV1-6A0A0C4DH72 117 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 IGHV3-64DA0A0J9YX35 117 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 H0Y980 276 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 HSPB6O14558 160 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 FBXO24O75426 580 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 CD200P41217 278 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 SWI5Q1ZZU3 235 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 PUSL1Q8N0Z8 303 aaKnown RBP16.06■□□□□ 0.16
SYF2-204ENST00000476231 GAPTQ8N292 157 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 CLRN3Q8NCR9 226 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 NUP37Q8NFH4 326 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 OR5D13Q8NGL4 314 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 SECTM1Q8WVN6 248 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 RDH5Q92781 318 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 ZDHHC8Q9ULC8 765 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 RCL1Q9Y2P8 373 aaKnown RBP16.06■□□□□ 0.16
SYF2-204ENST00000476231 A6NLC8 198 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 RNASEK-C17orf49H0YIS7 233 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 TOR1AO14656 332 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 SH2D1BO14796 132 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 DANCRP0C864 163 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 VDAC1P21796 283 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 SELENOVP59797 346 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 HLA-DRB3P79483 266 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 PRAMEF6Q5VXH4 476 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 VHLLQ6RSH7 139 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 MEX3BQ6ZN04 569 aaKnown RBP16.06■□□□□ 0.16
SYF2-204ENST00000476231 WFDC8Q8IUA0 241 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 OR2Z1Q8NG97 314 aa16.06■□□□□ 0.16
SYF2-204ENST00000476231 STRAPQ9Y3F4 350 aaKnown RBP16.06■□□□□ 0.16
SYF2-204ENST00000476231 NKX2-6A6NCS4 301 aa16.05■□□□□ 0.16
SYF2-204ENST00000476231 C3orf80F5H4A9 247 aa16.05■□□□□ 0.16
SYF2-204ENST00000476231 PTBP3O95758 552 aaKnown RBP16.05■□□□□ 0.16
SYF2-204ENST00000476231 OR2H2O95918 312 aa16.05■□□□□ 0.16
SYF2-204ENST00000476231 SLC25A6P12236 298 aa16.05■□□□□ 0.16
SYF2-204ENST00000476231 NKX2-1P43699 371 aaPredicted RBP16.05■□□□□ 0.16
SYF2-204ENST00000476231 DVL1P1P54792 670 aaPredicted RBP16.05■□□□□ 0.16
SYF2-204ENST00000476231 SRSF3P84103 164 aaKnown RBP16.05■□□□□ 0.16
SYF2-204ENST00000476231 WDR82Q6UXN9 313 aa16.05■□□□□ 0.16
SYF2-204ENST00000476231 KIRREL1Q96J84 757 aa16.05■□□□□ 0.16
SYF2-204ENST00000476231 OR2W1Q9Y3N9 320 aa16.05■□□□□ 0.16
SYF2-204ENST00000476231 IGKV1D-13A0A0B4J2D9 117 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 THBDP07204 575 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 IGKV1-13P0DP09 117 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 MUC1P15941 1255 aaPredicted RBP16.04■□□□□ 0.16
SYF2-204ENST00000476231 NMSQ5H8A3 153 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 DHRS7BQ6IAN0 325 aaPredicted RBP16.04■□□□□ 0.16
SYF2-204ENST00000476231 FAM122CQ6P4D5 195 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 Q6ZRG5 221 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 ZNF826PQ6ZT77 177 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 H1FOOQ8IZA3 346 aaPredicted RBP16.04■□□□□ 0.16
SYF2-204ENST00000476231 OR2C3Q8N628 320 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 SMIM3Q9BZL3 60 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 SLC25A31Q9H0C2 315 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 WFDC1Q9HC57 220 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 FAM74A7A6NL05 159 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 SLC33A1O00400 549 aaPredicted RBP16.04■□□□□ 0.16
SYF2-204ENST00000476231 AKR1C2P52895 323 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 ID3Q02535 119 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 AKR1C1Q04828 323 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 GUCA2BQ16661 112 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 FAM74A3Q4VXF1 159 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 OR10J5Q8NHC4 309 aa16.04■□□□□ 0.16
SYF2-204ENST00000476231 SIRPB1O00241 398 aa16.03■□□□□ 0.16
SYF2-204ENST00000476231 SIGLEC5O15389 551 aa16.03■□□□□ 0.16
SYF2-204ENST00000476231 PGLYRP1O75594 196 aaPredicted RBP16.03■□□□□ 0.16
SYF2-204ENST00000476231 ASCL1P50553 236 aa16.03■□□□□ 0.16
SYF2-204ENST00000476231 HMGN3Q15651 99 aa16.03■□□□□ 0.16
SYF2-204ENST00000476231 LILRB1Q8NHL6 650 aaPredicted RBP16.03■□□□□ 0.16
SYF2-204ENST00000476231 PLEKHF2Q9H8W4 249 aa16.03■□□□□ 0.16
SYF2-204ENST00000476231 CCL28Q9NRJ3 127 aa16.03■□□□□ 0.16
SYF2-204ENST00000476231 UFSP2Q9NUQ7 469 aa16.03■□□□□ 0.16
SYF2-204ENST00000476231 NUPL2O15504 423 aaKnown RBP16.02■□□□□ 0.16
SYF2-204ENST00000476231 HAND1O96004 215 aa16.02■□□□□ 0.16
SYF2-204ENST00000476231 ARHGDIBP52566 201 aa16.02■□□□□ 0.16
SYF2-204ENST00000476231 EWSR1Q01844 656 aaKnown RBP eCLIP16.02■□□□□ 0.16
SYF2-204ENST00000476231 ZNF266Q14584 549 aa16.02■□□□□ 0.16
SYF2-204ENST00000476231 ACP7Q6ZNF0 438 aa16.02■□□□□ 0.16
SYF2-204ENST00000476231 BSCL2Q96G97 398 aaPredicted RBP16.02■□□□□ 0.16
SYF2-204ENST00000476231 MRPL37Q9BZE1 423 aaKnown RBP16.02■□□□□ 0.16
SYF2-204ENST00000476231 TAAR3PQ9P1P4 343 aa16.02■□□□□ 0.16
SYF2-204ENST00000476231 TLN1Q9Y490 2541 aaKnown RBP16.02■□□□□ 0.15
SYF2-204ENST00000476231 TMEM8BA6NDV4 472 aa16.02■□□□□ 0.15
SYF2-204ENST00000476231 DPRXA6NFQ7 191 aa16.02■□□□□ 0.15
SYF2-204ENST00000476231 PITX3O75364 302 aa16.02■□□□□ 0.15
SYF2-204ENST00000476231 F2RP25116 425 aa16.02■□□□□ 0.15
SYF2-204ENST00000476231 C20orf204Q6ZNR8 217 aa16.02■□□□□ 0.15
SYF2-204ENST00000476231 OR10Z1Q8NGY1 313 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms