RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CCR7P32248 378 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 MPIP34949 423 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 OPRK1P41145 380 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 ZNF83P51522 516 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 B2MP61769 119 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 N4BP2L1Q5TBK1 243 aaPredicted RBP3.18□□□□□ -1.9
SMC5-203ENST00000475540 SPATA31B1PQ5VZV4 182 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 ZFP1Q6P2D0 407 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 NIT1Q86X76 327 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 TMEM161BQ8NDZ6 487 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 LINC01560Q8TB33 94 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 ASB17Q8WXJ9 295 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 SLC25A46Q96AG3 418 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 DOK1Q99704 481 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 ZNF717Q9BY31 904 aaPredicted RBP3.18□□□□□ -1.9
SMC5-203ENST00000475540 C21orf62Q9NYP8 219 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 STOML2Q9UJZ1 356 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 BTRCQ9Y297 605 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 SAMHD1Q9Y3Z3 626 aaKnown RBP3.18□□□□□ -1.9
SMC5-203ENST00000475540 PTPRTO14522 1441 aa3.18□□□□□ -1.9
SMC5-203ENST00000475540 GMNCA6NCL1 334 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 D6RAR5 112 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 ZNF189O75820 626 aaPredicted RBP3.17□□□□□ -1.9
SMC5-203ENST00000475540 HLA-DQB1P01920 261 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 ZNF806P0C7X5 589 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 GTF2F2P13984 249 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 UCHL3P15374 230 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 INPP1P49441 399 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 RAB2AP61019 212 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 RANP62826 216 aaKnown RBP3.17□□□□□ -1.9
SMC5-203ENST00000475540 DR1Q01658 176 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 IHHQ14623 411 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 CASP8Q14790 479 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 HENMT1Q5T8I9 393 aaKnown RBP3.17□□□□□ -1.9
SMC5-203ENST00000475540 TMEM215Q68D42 235 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 FAM131AQ6UXB0 335 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 CCDC121Q6ZUS5 278 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 NT5DC3Q86UY8 548 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 OSR2Q8N2R0 312 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 OR2M3Q8NG83 312 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 OR2Z1Q8NG97 314 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 OR9A2Q8NGT5 310 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 EEF1AKMT1Q8WVE0 214 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 EIF5A2Q9GZV4 153 aaKnown RBP3.17□□□□□ -1.9
SMC5-203ENST00000475540 SND1-IT1Q9HBX3 110 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 XPNPEP1Q9NQW7 623 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 ARL2BPQ9Y2Y0 163 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 AHDC1Q5TGY3 1603 aaPredicted RBP3.17□□□□□ -1.9
SMC5-203ENST00000475540 COL27A1Q8IZC6 1860 aaPredicted RBP3.17□□□□□ -1.9
SMC5-203ENST00000475540 ATRNO75882 1429 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 MIA3Q5JRA6 1907 aa3.17□□□□□ -1.9
SMC5-203ENST00000475540 FLT4P35916 1363 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 E5RI56 91 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 KCNK2O95069 426 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 CXorf1O96002 111 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 ATP5G1P05496 136 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 OR4A8P0C604 315 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 CTSEP14091 401 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 CXCL2P19875 107 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 CXCL3P19876 107 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 ALOX5APP20292 161 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 PRPS1L1P21108 318 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 DDTP30046 118 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 CMC4P56277 68 aaPredicted RBP3.16□□□□□ -1.9
SMC5-203ENST00000475540 NAA20P61599 178 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 BTN1A1Q13410 526 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 RSU1Q15404 277 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 GUK1Q16774 197 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 LRRC75BQ2VPJ9 315 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 OR10K2Q6IF99 312 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 FAM19A3Q7Z5A8 133 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 NAA40Q86UY6 237 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 ZBTB8OSQ8IWT0 167 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 OR1P1Q8NH06 330 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 OR52N1Q8NH53 320 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 OR51H1Q8NH63 302 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 JOSD2Q8TAC2 188 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 L3HYPDHQ96EM0 354 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 OR7D2Q96RA2 312 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 EBNA1BP2Q99848 306 aaKnown RBP3.16□□□□□ -1.9
SMC5-203ENST00000475540 SELENOSQ9BQE4 189 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 MS4A8Q9BY19 250 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 TLNRD1Q9H1K6 362 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 OR51I1Q9H343 314 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 VPS29Q9UBQ0 182 aa3.16□□□□□ -1.9
SMC5-203ENST00000475540 IGHV1-3A0A0C4DH29 117 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 ARGFXA6NJG6 315 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 CLDN24A6NM45 220 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 BTNL10A8MVZ5 291 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 ZNF207O43670 478 aaKnown RBP3.15□□□□□ -1.91
SMC5-203ENST00000475540 FADS1O60427 444 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 SERPINB9P50453 376 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 HPCAP84074 193 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 BATFQ16520 125 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 TMEM241Q24JQ0 296 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 CYHR1Q6ZMK1 362 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 CLDN22Q8N7P3 220 aa3.15□□□□□ -1.91
SMC5-203ENST00000475540 GALMQ96C23 342 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms