RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZNF497Q6ZNH5 498 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 ASCC1Q8N9N2 400 aaKnown RBP12.83□□□□□ -0.36
CPSF3-203ENST00000475482 LY6G5BQ8NDX9 201 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 OR51S1Q8NGJ8 323 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 OR56B4Q8NH76 319 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 MED30Q96HR3 178 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 SCGB3A2Q96PL1 93 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 TBX15Q96SF7 602 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 HDHD3Q9BSH5 251 aaPredicted RBP12.83□□□□□ -0.36
CPSF3-203ENST00000475482 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 PPA2Q9H2U2 334 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 Q9N2K0 584 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 ZNF230Q9UIE0 474 aaPredicted RBP12.83□□□□□ -0.36
CPSF3-203ENST00000475482 IGKV1D-17A0A075B6S4 117 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 A0A1B0GW55 424 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 INMT-MINDY4F8WBC2 141 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 NDUFB6O95139 128 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 PMP2P02689 132 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 RNASE1P07998 156 aaKnown RBP12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DUX4L2P0CJ85 424 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DUX4L3P0CJ86 424 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DUX4L4P0CJ87 422 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DUX4L5P0CJ88 424 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DUX4L6P0CJ89 424 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DUX4L7P0CJ90 424 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 HKR1P10072 659 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 ECI1P42126 302 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 CCR6P51684 374 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 BAMBIQ13145 260 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 SLC9A3R2Q15599 337 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 SCGB2B2Q4G0G5 96 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 TRAT1Q6PIZ9 186 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DUX4L9Q6RFH8 374 aaPredicted RBP12.82□□□□□ -0.36
CPSF3-203ENST00000475482 GAPTQ8N292 157 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 OR5T2Q8NGG2 359 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 ANGPTL6Q8NI99 470 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DYRK2Q92630 601 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 SDSLQ96GA7 329 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 CCL13Q99616 98 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 GINS4Q9BRT9 223 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 TINAGL1Q9GZM7 467 aaPredicted RBP12.82□□□□□ -0.36
CPSF3-203ENST00000475482 MMP28Q9H239 520 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 NUDT15Q9NV35 164 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 EHFQ9NZC4 300 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 KCNIP1Q9NZI2 227 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 DUX4Q9UBX2 424 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 RPUSD1Q9UJJ7 312 aaKnown RBP12.82□□□□□ -0.36
CPSF3-203ENST00000475482 TRAPPC2LQ9UL33 140 aa12.82□□□□□ -0.36
CPSF3-203ENST00000475482 CENPVL3A0A0U1RRI6 287 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 TRDCB7Z8K6 153 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 HAX1O00165 279 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 MGST3O14880 152 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 GPR37O15354 613 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 H2AFB2P0C5Z0 115 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 GLP1RP43220 463 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 CEBPDP49716 269 aaPredicted RBP12.81□□□□□ -0.36
CPSF3-203ENST00000475482 ATXN7L3Q14CW9 347 aaPredicted RBP12.81□□□□□ -0.36
CPSF3-203ENST00000475482 AWAT1Q58HT5 328 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 GPR157Q5UAW9 335 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 FAAP20Q6NZ36 180 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 ZNF788Q6ZQV5 615 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 IDO2Q6ZQW0 420 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 OVCH2Q7RTZ1 564 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 SLC36A1Q7Z2H8 476 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 FGFRL1Q8N441 504 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 CD177Q8N6Q3 437 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 OR4D10Q8NGI6 311 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 OR6F1Q8NGZ6 308 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 C8orf46Q8TAG6 207 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 MRPL30Q8TCC3 161 aaKnown RBP12.81□□□□□ -0.36
CPSF3-203ENST00000475482 C20orf85Q9H1P6 137 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 NCOR1P1Q9H4R4 102 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 RAB9BQ9NP90 201 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 ZNF222Q9UK12 451 aa12.81□□□□□ -0.36
CPSF3-203ENST00000475482 K7N7A8 449 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 PSPNO60542 156 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 PRAF2O60831 178 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 TOX4O94842 621 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 DIRAS3O95661 229 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 ZNF735P0CB33 412 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 OR3A1P47881 315 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 IL13RA1P78552 427 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 KRBOX4Q5JUW0 171 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 C6orf183Q5T699 404 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 ZNF880Q6PDB4 577 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 BRD3OSQ6XYD6 125 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 C17orf107Q6ZR85 190 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 ZNF554Q86TJ5 538 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 FAM216BQ8N7L0 139 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 OR4A4PQ8NGN8 299 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 TERB2Q8NHR7 220 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 MAFIPQ8WZ33 124 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 DUX5Q96PT3 197 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 PCGF1Q9BSM1 259 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 KPTNQ9Y664 436 aa12.8□□□□□ -0.36
CPSF3-203ENST00000475482 hCG_2014768A0A024R1R8 64 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 A0A1B0GVG6 124 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 MDFIC2A0A1B0GVS7 189 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 TMEM82A0PJX8 343 aa12.79□□□□□ -0.36
CPSF3-203ENST00000475482 FABP7O15540 132 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms