RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 MCFD2Q8NI22 146 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 RFESDQ8TAC1 157 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 SLC25A38Q96DW6 304 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 DCUN1D5Q9BTE7 237 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 C6orf62Q9GZU0 229 aaPredicted RBP9.61□□□□□ -0.87
CLIP2-204ENST00000474962 C12orf4Q9NQ89 552 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 CALYQ9NYX4 217 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 VPREB3Q9UKI3 123 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 SESN1Q9Y6P5 492 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 FOXI3A8MTJ6 420 aaPredicted RBP9.6□□□□□ -0.87
CLIP2-204ENST00000474962 TOR1AO14656 332 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 XRCC3O43542 346 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 ORC5O43913 435 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 COX7A1P24310 79 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 LGALS4P56470 323 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 LTC4SQ16873 150 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 PNLIPRP3Q17RR3 467 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 MIDNQ504T8 468 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 PRAMEF5Q5TYX0 476 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 DHRS7BQ6IAN0 325 aaPredicted RBP9.6□□□□□ -0.87
CLIP2-204ENST00000474962 HEPN1Q6WQI6 88 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 IZUMO1Q8IYV9 350 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 BEND2Q8NDZ0 799 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 OR10A7Q8NGE5 316 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 MRPL30Q8TCC3 161 aaKnown RBP9.6□□□□□ -0.87
CLIP2-204ENST00000474962 SSX3Q99909 188 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 RBM38Q9H0Z9 239 aaKnown RBP9.6□□□□□ -0.87
CLIP2-204ENST00000474962 C16orf95Q9H693 158 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 TAF9BQ9HBM6 251 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 IDI2-AS1Q9NZ38 188 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 MRPS7Q9Y2R9 242 aaKnown RBP9.6□□□□□ -0.87
CLIP2-204ENST00000474962 SIGLEC9Q9Y336 463 aa9.6□□□□□ -0.87
CLIP2-204ENST00000474962 BTBD17A6NE02 478 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 H3BUX3 64 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 SDCBPO00560 298 aaPredicted RBP9.59□□□□□ -0.87
CLIP2-204ENST00000474962 MFNGO00587 321 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 TSPAN9O75954 239 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 NAPSAO96009 420 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
CLIP2-204ENST00000474962 RCC1P18754 421 aaPredicted RBP9.59□□□□□ -0.87
CLIP2-204ENST00000474962 ELK1P19419 428 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 S100A5P33763 92 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 SSTR5P35346 364 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 PRRX1P54821 245 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 DLX6P56179 175 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 LY6EQ16553 131 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 ZNF260Q3ZCT1 412 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 HACD4Q5VWC8 232 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 TCF23Q7RTU1 214 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 ZNF554Q86TJ5 538 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 GAPTQ8N292 157 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 DTX3Q8N9I9 347 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 GALMQ96C23 342 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 HDHD3Q9BSH5 251 aaPredicted RBP9.59□□□□□ -0.87
CLIP2-204ENST00000474962 TMEM133Q9H2Q1 129 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.59□□□□□ -0.87
CLIP2-204ENST00000474962 BATF3Q9NR55 127 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 GNG12Q9UBI6 72 aa9.59□□□□□ -0.87
CLIP2-204ENST00000474962 PRKDCP78527 4128 aaKnown RBP9.59□□□□□ -0.87
CLIP2-204ENST00000474962 TRBV6-6A0A0A6YYG2 114 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 TMEM235A6NFC5 223 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 C12orf77C9JDV5 145 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 M0QZ24 198 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 TIMM23O14925 209 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 HBZP02008 142 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 KIR2DS4P43632 304 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 KIR2DS1Q14954 304 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 C17orf58Q2M2W7 97 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 TMEM30BQ3MIR4 351 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 HIST2H2BDQ6DRA6 164 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 RTN4RL2Q86UN3 420 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 ABHD12Q8N2K0 398 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 OR5R1Q8NH85 324 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 UBALD1Q8TB05 177 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 C15orf40Q8WUR7 153 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 IL1F10Q8WWZ1 152 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 DIRAS2Q96HU8 199 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 ST6GALNAC5Q9BVH7 336 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 CLEC7AQ9BXN2 247 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 MEGF9Q9H1U4 602 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 AUNIPQ9H7T9 357 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 MBNL3Q9NUK0 354 aaKnown RBP9.58□□□□□ -0.88
CLIP2-204ENST00000474962 EXTL2Q9UBQ6 330 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 KCNK7Q9Y2U2 307 aa9.58□□□□□ -0.88
CLIP2-204ENST00000474962 TRDCB7Z8K6 153 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 NPIPB11E5RHQ5 1161 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 CTDSP2O14595 271 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 HSPA12AO43301 675 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 RGS11O94810 467 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 ARG1P05089 322 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 CGB3P0DN86 165 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 CGB7P0DN87 165 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 DTYMKP23919 212 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 PRSS3P35030 304 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 CBX5P45973 191 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 RAB13P51153 203 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 TAS2R20P59543 309 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 PDLIM3Q53GG5 364 aaPredicted RBP9.57□□□□□ -0.88
CLIP2-204ENST00000474962 OR52M1Q8NGK5 317 aa9.57□□□□□ -0.88
CLIP2-204ENST00000474962 OR1L1Q8NH94 360 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms