RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 METTL8Q9H825 291 aaKnown RBP8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DUX4Q9UBX2 424 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 ITGB1BP2Q9UKP3 347 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 KPTNQ9Y664 436 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 TRBV6-7A0A0A0MS04 114 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 NPIPB11E5RHQ5 1161 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 RNF223E7ERA6 249 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 F2RL2O00254 374 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 CREBL2O60519 120 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-206ENST00000474564 YPEL1O60688 119 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 MSMBP08118 114 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 IL3RAP26951 378 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 DVL1P1P54792 670 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-206ENST00000474564 RAG2P55895 527 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 TAS2R31P59538 309 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 LTC4SQ16873 150 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 Q3ZCU0 254 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 ABCA11PQ4W5N1 156 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 IGSF11Q5DX21 431 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 DCAF12L2Q5VW00 463 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 NCR3LG1Q68D85 454 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 CMTM1Q8IZ96 169 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 CADM3Q8N126 398 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 OR1L1Q8NH94 360 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 YPEL2Q96QA6 119 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 ZNF2Q9BSG1 426 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-206ENST00000474564 CABLES2Q9BTV7 478 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 ZNF221Q9UK13 617 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 FLVCR2Q9UPI3 526 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 POLR3KQ9Y2Y1 108 aaPredicted RBP8.54□□□□□ -1.04
COL12A1-206ENST00000474564 OR2W1Q9Y3N9 320 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 SESN1Q9Y6P5 492 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 RELNP78509 3460 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 DOPEY2Q9Y3R5 2298 aa8.54□□□□□ -1.04
COL12A1-206ENST00000474564 PIGBOS1A0A0B4J2F0 54 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 IGHV2-70DA0A0C4DH43 119 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 C17orf98A8MV24 154 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 C15orf65H3BRN8 121 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 CCNKO75909 580 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 TOX4O94842 621 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 SSTR5P35346 364 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 LGALS4P56470 323 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 FXYD4P59646 89 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 ARF6P62330 175 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 ZNF273Q14593 569 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 SURF2Q15527 256 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-206ENST00000474564 LY6G6FQ5SQ64 297 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 CYB5R2Q6BCY4 276 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 SLC38A6Q8IZM9 456 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 ZDHHC22Q8N966 263 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 CCDC71LQ8N9Z2 235 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 UXS1Q8NBZ7 420 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 ZNF596Q8TC21 504 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 TNFRSF14Q92956 283 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 TOMM40LQ969M1 308 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 PPP1R14BQ96C90 147 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 OR51J1Q9H342 316 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 LINC00574Q9H8X3 128 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 SLC2A8Q9NY64 477 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 RDH8Q9NYR8 311 aa8.53□□□□□ -1.04
COL12A1-206ENST00000474564 AMMECR1Q9Y4X0 333 aaPredicted RBP8.53□□□□□ -1.04
COL12A1-206ENST00000474564 SPTAN1Q13813 2472 aaKnown RBP8.53□□□□□ -1.04
COL12A1-206ENST00000474564 ADGRG4Q8IZF6 3080 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 IGKV1D-8A0A087WSZ0 117 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 MEX3AA1L020 520 aaKnown RBP8.52□□□□□ -1.05
COL12A1-206ENST00000474564 HMX3A6NHT5 357 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 RNF212BA8MTL3 300 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 J3QLI3 93 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 ITGB1BP1O14713 200 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 TGFAP01135 160 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 PPYP01298 95 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 CGB3P0DN86 165 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 CGB7P0DN87 165 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 IGHV1-8P0DP01 117 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 CCL3L1P16619 93 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 AKR1C4P17516 323 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 ANXA7P20073 488 aaKnown RBP8.52□□□□□ -1.05
COL12A1-206ENST00000474564 NFYAP23511 347 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-206ENST00000474564 OMGP23515 440 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 VAMP1P23763 118 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 PRTN3P24158 256 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 CEACAM3P40198 252 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 UCP3P55916 312 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 RRAS2P62070 204 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-206ENST00000474564 C17orf58Q2M2W7 97 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 MORN2Q502X0 79 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 PRAMEF5Q5TYX0 476 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 H1FOOQ8IZA3 346 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-206ENST00000474564 FGFRL1Q8N441 504 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 ZBTB34Q8NCN2 500 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 OR52L2PQ8NGH6 319 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 OR10V1Q8NGI7 309 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 OR10X1Q8NGY0 326 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 OR9G1Q8NH87 305 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 MARCH1Q8TCQ1 289 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 TMEM186Q96B77 213 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 ZNF486Q96H40 463 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-206ENST00000474564 AKR1E2Q96JD6 320 aa8.52□□□□□ -1.05
COL12A1-206ENST00000474564 S1PR3Q99500 378 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms