RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 AURKBQ96GD4 344 aaPredicted RBP4.78□□□□□ -1.64
RTF1-203ENST00000473214 ACY3Q96HD9 319 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 PGLYRP4Q96LB8 373 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 RDH12Q96NR8 316 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 OR2M4Q96R27 311 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 OR52B2Q96RD2 323 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 OR52E6Q96RD3 313 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 SLC17A9Q9BYT1 436 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 NANOGQ9H9S0 305 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 VSIG4Q9Y279 399 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 EP300Q09472 2414 aaPredicted RBP4.78□□□□□ -1.64
RTF1-203ENST00000473214 CEP250Q9BV73 2442 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 NLRC5Q86WI3 1866 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 NAV1Q8NEY1 1877 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 SETXQ7Z333 2677 aaKnown RBP4.77□□□□□ -1.65
RTF1-203ENST00000473214 TRIP12Q14669 1992 aaPredicted RBP4.77□□□□□ -1.65
RTF1-203ENST00000473214 IGHV4-61A0A0C4DH41 118 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 FAM92AA1XBS5 289 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 OR5H1A6NKK0 313 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 LOC730098B7Z3J9 87 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 E7EQ34 232 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 G3V2T6 193 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 CRLF1O75462 422 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 ARL6IP5O75915 188 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 IGHV3-9P01782 118 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 IGHV4-59P01825 116 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 TTRP02766 147 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 SPNP16150 400 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 MIPP30301 263 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 GGT2P36268 569 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 RPL29P47914 159 aaKnown RBP4.77□□□□□ -1.65
RTF1-203ENST00000473214 RBP2P50120 134 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 CACNG7P62955 275 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 CDK5Q00535 292 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 ZNF169Q14929 603 aaPredicted RBP4.77□□□□□ -1.65
RTF1-203ENST00000473214 RNASE10Q5GAN6 216 aaKnown RBP4.77□□□□□ -1.65
RTF1-203ENST00000473214 TTC32Q5I0X7 151 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 PAGE3Q5JUK9 113 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 FBXL22Q6P050 247 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 C1orf158Q8N1D5 194 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 OSR2Q8N2R0 312 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 SLC45A3Q96JT2 553 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 SERPINI1Q99574 410 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 KIR2DL4Q99706 377 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 PLSCR3Q9NRY6 295 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 C14orf105Q9NVL8 296 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 TAAR2Q9P1P5 351 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 GNG8Q9UK08 70 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 V9GY05 133 aa4.77□□□□□ -1.65
RTF1-203ENST00000473214 FRYLO94915 3013 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 FASNP49327 2511 aaKnown RBP4.76□□□□□ -1.65
RTF1-203ENST00000473214 IGLV5-52A0A0A0MRZ9 124 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 TRAV8-2A0A0B4J237 113 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 TEX50A0A1B0GTY4 177 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 I3L4J1 428 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 XKRYO14609 159 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 MGST3O14880 152 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 DEGS1O15121 323 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 SUPT7LO94864 414 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 NGFP01138 241 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 EDN1P05305 212 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 MMP7P09237 267 aaPredicted RBP4.76□□□□□ -1.65
RTF1-203ENST00000473214 AGTR1P30556 359 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 PHBP35232 272 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 KIR2DS2P43631 304 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 AKR1D1P51857 326 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 PIGPP57054 158 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 RRAS2P62070 204 aaPredicted RBP4.76□□□□□ -1.65
RTF1-203ENST00000473214 GNG5P63218 68 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 C1DQ13901 141 aaKnown RBP4.76□□□□□ -1.65
RTF1-203ENST00000473214 ODF3L2Q3SX64 289 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 AVPI1Q5T686 147 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 GSG1LQ6UXU4 331 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 FA2HQ7L5A8 372 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 ZNF283Q8N7M2 679 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 SLC35G3Q8N808 338 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 ZNF491Q8N8L2 437 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 AQP11Q8NBQ7 271 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 OR4M1Q8NGD0 313 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 OR1S1Q8NH92 325 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 ZNRF2Q8NHG8 242 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 GALMQ96C23 342 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 ZNF486Q96H40 463 aaPredicted RBP4.76□□□□□ -1.65
RTF1-203ENST00000473214 FMC1Q96HJ9 113 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 C14orf144Q96I85 54 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 BTN2A3PQ96KV6 586 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 CAPZA3Q96KX2 299 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 METTL26Q96S19 204 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 RNASE7Q9H1E1 156 aaKnown RBP4.76□□□□□ -1.65
RTF1-203ENST00000473214 DEPPQ9NTK1 212 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 SPANXCQ9NY87 97 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 SPRR3Q9UBC9 169 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 KCNE3Q9Y6H6 103 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 SCN10AQ9Y5Y9 1956 aa4.76□□□□□ -1.65
RTF1-203ENST00000473214 A0A0B4J2A0 478 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 IGKV1D-13A0A0B4J2D9 117 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 GMNCA6NCL1 334 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 INAFM1C9JVW0 142 aa4.75□□□□□ -1.65
RTF1-203ENST00000473214 COPEO14579 308 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms