RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SLC2A8Q9NY64 477 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 OR6C3Q9NZP0 311 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 TRAPPC2LQ9UL33 140 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 EDARQ9UNE0 448 aa8.05□□□□□ -1.12
SF3A1-207ENST00000471342 ABCA1O95477 2261 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 IGHV3-43A0A0B4J1X8 118 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 B4DSR2 109 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 ITGB1BP1O14713 200 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 YPEL1O60688 119 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 FOXH1O75593 365 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 RBP4P02753 201 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 LIPFP07098 398 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 IGHV3-43DP0DP04 118 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 FPR2P25090 351 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 GLP1RP43220 463 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 CBX5P45973 191 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 DVL1P1P54792 670 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-207ENST00000471342 LINC00205P59089 165 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 KLRD1Q13241 179 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 ASAH1Q13510 395 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 KIAA2026Q5HYC2 2103 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 STEAP1BQ6NZ63 245 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 MOB1BQ7L9L4 216 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 NLRC3Q7RTR2 1065 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 FAM185AQ8N0U4 392 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 DYNAPQ8N1N2 210 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 C8orf31Q8N9H6 132 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 OR11H6Q8NGC7 330 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 OR10A7Q8NGE5 316 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 OR4P4Q8NGL7 312 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 C15orf40Q8WUR7 153 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 H1FXQ92522 213 aaKnown RBP8.04□□□□□ -1.12
SF3A1-207ENST00000471342 TMEM186Q96B77 213 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 UPRTQ96BW1 309 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 RAB39BQ96DA2 213 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF714Q96N38 554 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 YPEL2Q96QA6 119 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 IDI2-AS1Q9NZ38 188 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 PSG11Q9UQ72 335 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 KPTNQ9Y664 436 aa8.04□□□□□ -1.12
SF3A1-207ENST00000471342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.121e-8■■□□□ 13.8
SF3A1-207ENST00000471342 TRGV10A0A0A0MS01 117 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 CENPVL3A0A0U1RRI6 287 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 ENSAO43768 121 aaKnown RBP8.03□□□□□ -1.12
SF3A1-207ENST00000471342 IGHV3-7P01780 117 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 HOXB4P17483 251 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-207ENST00000471342 AADACP22760 399 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 NFYAP23511 347 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-207ENST00000471342 SLC6A1P30531 599 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 GNRHRP30968 328 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 PPP1CCP36873 323 aaKnown RBP8.03□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF137PP52743 207 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 CDK10Q15131 360 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 METTL11BQ5VVY1 283 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 SLC25A48Q6ZT89 311 aaKnown RBP8.03□□□□□ -1.12
SF3A1-207ENST00000471342 LINC00311Q8N616 119 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF565Q8N9K5 539 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 LINC01356Q8N9X3 169 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 NEK7Q8TDX7 302 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 RTBDNQ9BSG5 229 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-207ENST00000471342 FXYD6Q9H0Q3 95 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 OCEL1Q9H607 264 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 ABCB10Q9NRK6 738 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 HIF1ANQ9NWT6 349 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 JPT1Q9UK76 154 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 PCDHB10Q9UN67 800 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 SESN1Q9Y6P5 492 aa8.03□□□□□ -1.12
SF3A1-207ENST00000471342 A0A1W2PPE3 182 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 FAM172BPA6NC97 362 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF736B4DX44 427 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-207ENST00000471342 OR5H8P0DN80 308 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 IGHV4-38-2P0DP08 117 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 TBPP20226 339 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 TAS2R19P59542 299 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 C6orf183Q5T699 404 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 CD276Q5ZPR3 534 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 ZNF782Q6ZMW2 699 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-207ENST00000471342 VMO1Q7Z5L0 202 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 OR10V1Q8NGI7 309 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 OR51S1Q8NGJ8 323 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 ZFAND2BQ8WV99 257 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 BORCS5Q969J3 196 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 TMEM230Q96A57 120 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 PHF21AQ96BD5 680 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 GALMQ96C23 342 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 TMEM133Q9H2Q1 129 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 SIRT7Q9NRC8 400 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 RDH8Q9NYR8 311 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 LPAR3Q9UBY5 353 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 ITGB1BP2Q9UKP3 347 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 GAB2Q9UQC2 676 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 VSIG4Q9Y279 399 aa8.02□□□□□ -1.13
SF3A1-207ENST00000471342 IGHV2-26A0A0B4J1V2 119 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 TRAV20A0A0B4J274 112 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 A0A0B4J293 547 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 FUOMA2VDF0 154 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 J3QR06 171 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 CD5LO43866 347 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 RAB3DO95716 219 aa8.01□□□□□ -1.13
SF3A1-207ENST00000471342 AKAIN1P0CW23 69 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms