RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ASCC1Q8N9N2 400 aaKnown RBP7.36□□□□□ -1.23
SF3A1-206ENST00000471037 OR5D13Q8NGL4 314 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 GPX8Q8TED1 209 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 SMIM4Q8WVI0 70 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 FCAMRQ8WWV6 532 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 BORCS5Q969J3 196 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 GAFA1Q96PS6 74 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 CMSS1Q9BQ75 279 aaKnown RBP7.36□□□□□ -1.23
SF3A1-206ENST00000471037 SULT4A1Q9BR01 284 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 FAAP24Q9BTP7 215 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 RIMS4Q9H426 269 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-206ENST00000471037 C12orf4Q9NQ89 552 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 MAB21L2Q9Y586 359 aa7.36□□□□□ -1.23
SF3A1-206ENST00000471037 TRBV6-6A0A0A6YYG2 114 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 A0A1W2PRD5 423 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 A0A1W2PRF3 423 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 A0A1W2PRM7 423 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 TMEM82A0PJX8 343 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 UBE2QL1A1L167 161 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 H3BUX3 64 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 HSPB6O14558 160 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 MGST3O14880 152 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 PSPNO60542 156 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 TK1P04183 234 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 SELLP14151 372 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 DTYMKP23919 212 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 OR3A1P47881 315 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 DLX1P56177 255 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 ACTBP60709 375 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 TRIQKQ629K1 86 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 RTN4RL2Q86UN3 420 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 PNKDQ8N490 385 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 OR4C13Q8NGP0 309 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 OR52I2Q8NH67 350 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 NUDCD2Q8WVJ2 157 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 H1FXQ92522 213 aaKnown RBP7.35□□□□□ -1.23
SF3A1-206ENST00000471037 SDHCQ99643 169 aaPredicted RBP7.35□□□□□ -1.23
SF3A1-206ENST00000471037 OCSTAMPQ9BR26 566 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 CHST6Q9GZX3 395 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 RAB18Q9NP72 206 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 PALMDQ9NP74 551 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 ETAA1Q9NY74 926 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 SLC25A10Q9UBX3 287 aaPredicted RBP7.35□□□□□ -1.23
SF3A1-206ENST00000471037 AK3Q9UIJ7 227 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 SIGLEC9Q9Y336 463 aa7.35□□□□□ -1.23
SF3A1-206ENST00000471037 TRBV23-1A0A0A0MS06 115 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 TMEM30CPA0ZSE6 113 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 FUOMA2VDF0 154 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 J3QRK9 145 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 SSX5O60225 188 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 UPK1BO75841 260 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 RBBP9O75884 186 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 NAPSAO96009 420 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 PRB2P02812 416 aaPredicted RBP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 TFF1P04155 84 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 PTHLHP12272 177 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 ERP29P30040 261 aaKnown RBP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 RCVRNP35243 200 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 DGCR2P98153 550 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 ATXN7L3Q14CW9 347 aaPredicted RBP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 GRK1Q15835 563 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 SRSF7Q16629 238 aaKnown RBP eCLIP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 LRRC75BQ2VPJ9 315 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 HCP5Q6MZN7 132 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF497Q6ZNH5 498 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 LIAT1Q6ZQX7 453 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 MOB1BQ7L9L4 216 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 TRAPPC6BQ86SZ2 158 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 GAPTQ8N292 157 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 KLHDC1Q8N7A1 406 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 ZNRF1Q8ND25 227 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 TMEM185AQ8NFB2 350 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 OR4S1Q8NGB4 309 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 OR2T6Q8NHC8 308 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 DEDD2Q8WXF8 326 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 TRIM63Q969Q1 353 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 AJUBAQ96IF1 538 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 SSX3Q99909 188 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 THAP7Q9BT49 309 aaPredicted RBP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 MEGF9Q9H1U4 602 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 NCOR1P1Q9H4R4 102 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 CHMP1AQ9HD42 196 aaPredicted RBP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 IFT46Q9NQC8 304 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 TAS2R8Q9NYW2 309 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 MTFP1Q9UDX5 166 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 ZNF107Q9UII5 783 aaPredicted RBP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 ELF5Q9UKW6 265 aaPredicted RBP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 ANAPC10Q9UM13 185 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 MGAT4AQ9UM21 535 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 RBMX2Q9Y388 322 aaKnown RBP7.34□□□□□ -1.23
SF3A1-206ENST00000471037 PLXNB1O43157 2135 aa7.34□□□□□ -1.23
SF3A1-206ENST00000471037 A0A1W2PQ09 198 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 MT-ND4P03905 459 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 FCGR3AP08637 254 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 GSTT2BP0CG30 244 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 IL7P13232 177 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 GDNFP39905 211 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 INPP1P49441 399 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 P2RX3P56373 397 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 AP3S2P59780 193 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms